iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099237

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000348

Gene Name

POPTRDRAFT_772246; POPTR_0012s03960g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0012s03960	POPTR_0012s03960.1	POPTR_0012s03960.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.60e-31	109.3	23	94

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +p +flCpIsl+lM+dPv+l+sGitydr+sIe wl+ g+ tcPvt+q l++ d++Pn++lr++iq+w  +n+
   Q: 23   IPNQFLCPISLDLMKDPVTLSSGITYDRESIETWLEGGNFTCPVTNQVLRSFDQIPNHSLRKMIQDWGVANR 94
           799****************************************************************88776 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MVFSWRRKKA AREKLFKVQE LVIPNQFLCP ISLDLMKDPV TLSSGITYDR ESIETWLEGG 60
NFTCPVTNQV LRSFDQIPNH SLRKMIQDWG VANRNYGVDR IPTPRVPVLG AQVSEVLFSL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTTTTTA GTTGGAGAAG GAAGAAAGCT GCTCGAGAAA AGCTCTTTAA AGTCCAGGAG 60
TTGGTGATTC CAAACCAGTT TCTTTGCCCA ATATCTCTTG ATCTTATGAA GGATCCCGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0012s03960g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000169	Aegilops tauschii	41.74	9.00e-47	179.00
IUUC-Gma-042846	Glycine max	63.12	5.00e-143	499.00
IUUC-Mtr-057926	Medicago truncatula	60.52	2.00e-132	465.00
IUUC-Ogl-077723	Oryza glaberrima	44.63	1.00e-78	286.00
IUUC-Ogu-078447	Oryza glumaepatula	44.55	4.00e-80	291.00
IUUC-Ome-081665	Oryza meridionalis	44.74	3.00e-83	301.00
IUUC-Oni-082092	Oryza nivara	44.63	1.00e-78	286.00
IUUC-Oru-084868	Oryza rufipogon	44.63	1.00e-78	286.00
IUUC-Osa-085472	Oryza sativa	44.63	1.00e-78	286.00
IUUC-Ppe-102046	Prunus persica	64.02	9.00e-155	539.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence