iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121114

Ensembl Protein ID

EOY22307

UniProt Accession

A0A061FZJ4; A0A061FZJ4_THECC

Genbank Protein ID

EOY22307.1

Protein Name

Transducin/WD40 repeat-like superfamily protein

Genbank Nucleotide ID

CM001881

Gene Name

TCM_014521

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_014521	EOY22307	EOY22307

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-27	94.8	271	299
UBD/Beta-Prp	2.20e-55	188.9	139	352

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWD 29
           gH++++ cl    ++l+vsGs D t++vW 
   Q: 271  GHSGPILCL-InVGDLFVSGSSDRTVRVWQ 299
           8*******8.64349**************5 PP

UBD/Beta-Prp

   S: 13   itcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw....dls.tgkcvhtlkghedsvlslsfspsgdk 108
           ++ + + ++k+l+ + s+d++ k+w+v +  +l+s++ he++v+++  s++g +  tgs D++i vw      +   + v tl +h+++v +l+++++g++
   Q: 139  VSGLVILNQKELMYSVSWDKSFKIWNVNNRRCLESVKAHEDAVNTLVVSDNG-TVYTGSADGLISVWeranK-ErRHSLVATLDKHKSTVNALALNADGSV 237
           444555699******************************************9.9*************65422.24667788899***************** PP
   S: 109  lvsGshdrtirvwdletgqclee.......tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl..ktgk.llrtltgghtdsvyslsfdsng.....ke 194
           l sG+ dr i+vw+ + +   e+        l gh+g + c+   +  +l+vsGs Drtvr+W+   + g+ +   l+g h+++v+sl     g     + 
   Q: 238  LFSGGCDRSIMVWEKKGENNAENdhvgfveALWGHSGPILCLINVG--DLFVSGSSDRTVRVWQRgkEGGFhCSIVLEG-HEKPVKSLVAVARGvfegvFT 335
           *************998888887789***99*********9998888..9***************976445415555566.*********6665667777** PP
   S: 195  lvsgsldgtvklwdlqt 211
           + sgsld+ +++w++++
   Q: 336  FCSGSLDREIRVWEISR 352
           **************984 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MSSQLHVFPL QTLKHRCLAA LKTRSPHISC LAVRDNLLYA AAINEINVFD LSNHSPVDSF 60
NDDPTSGFVK SIAFNKTKIF TAHQDGKIRI WEITLSKKHQ LLTTLPTVKD RFLHFILPKN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTGCACAGAC AACTTCAAAG GAACCCATTT GATTAAGGTG CTTTAATATT GTTTGGCCTT 60
GTTAAACTCT TTTTTTAAAT GCTTAATGCA TAACAAAGAA GAGGAGCCCA ATACTCGTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-043121	Glycine max	57.73	3.00e-100	357.00
IUUC-Mtr-058524	Medicago truncatula	58.17	1.00e-110	391.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence