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Tag Content
UUCD2 ID IUUC-Cpo-022156
UUCD1 version UUC-CaP-00502
Ensembl Protein ID ENSCPOP00000010222.2
UniProt Accession H0VJ10; H0VJ10_CAVPO
Genbank Protein ID ENSCPOP00000010222
Protein Name Uncharacterized protein
Genbank Nucleotide ID AAKN02019316
Gene Name ATG16L1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSCPOG00000011372.3 ENSCPOT00000011478.2 ENSCPOP00000010222.2
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 4.10e-30 102.5 406 445
UBD/Beta-Prp 1.80e-63 214.5 315 605
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllks 38
    gH+++v + +f ++ ++vsGs+D t+k+WDlr+ v++k+
   Q: 406 GHSGKVLSAKFllDNARIVSGSHDRTLKLWDLRSKVCIKT 445
    8***********64489********************985 PP
   


   UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl..lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvht 89
    +++++h++ +++v+fsp+++llatg++d+++k+w+v k+ lsg +a++t+++f++ g +l+ +s+D + ++w ++++ ht
   Q: 315 LCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVLGDKCefKGALSGSNAGITSIEFDSAGAYLLAASNDFASRIWTVDDYRLRHT 403
    57899********************************9999988999****************************************** PP
   S: 90 lkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgg 178
    l+gh+ +vls +f ++ ++vsGshdrt+++wdl+++ c++++++g + c + +++++++sG+ D+++r+Wd+++++++r+++
   Q: 404 LTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSS----CNDIVCTEQCVMSGHFDKKIRFWDIRSESVVREME-- 486
    *****************************************9999988....888888889*************************6.. PP
   S: 179 htdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght....dnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlh 263
    ++v+ l+++++++el+s+s+d +k+ dl+t+ + +t+ + + ++v fsp++ +++ gs++g++++W + +g++ ktl++h
   Q: 487 LLGKVTALDLNPERTELLSCSRDDLLKIIDLRTNAVKQTFSAPGfkcgSDWTRVVFSPDGSYVAAGSAEGTLFVWSTLTGKVEKTLSKH 575
    69**********************************99999988888877777************************************ PP
   S: 264 nssvisvavlsfgdnvlvlgsedskvniwk 293
    +ss+i ++ +++ ++v++++ sk+ +w+
   Q: 576 HSSSINAVAWAPSGLHVVSVDKGSKAVLWA 605
    *****************************7 PP
   

Organism Cavia porcellus
Protein Sequence
(Fasta)
MSGLRTADFP RWKRHIAEEL RRRDRLQRQA FEEIILQYNK LLEKSDLHSV LAQKLQAEKH 60
DTPNRHEISP GHDGTWNDSQ LQEMAQLRIK HQEELTELHK KRGELAQLVI DLNNQMQQKD 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Cpo-022156|E3,WD_repeat;UBD,Beta-Prp|Cavia porcellus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGTCGGGGC TCCGTACGGC CGACTTCCCT CGCTGGAAAC GCCACATCGC GGAGGAGCTG 60
CGGCGCCGCG ACCGGCTGCA GAGGCAGGCG TTCGAGGAGA TCATCCTGCA GTGTGAGCCG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Cpo-022156|E3,WD_repeat;UBD,Beta-Prp|Cavia porcellus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR013923--Autophagy-rel_prot_16
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08614--ATG16
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0000421--C:autophagosome membrane
GO:0005930--C:axoneme
GO:0039689--P:negative stranded viral RNA replication

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000090 Aegilops tauschii 23.91 7.00e-33 135.00
IUUC-Aml-002242 Ailuropoda melanoleuca 88.48 0.00e+00 1012.00
IUUC-Atr-003073 Amborella trichopoda 27.61 1.00e-26 114.00
IUUC-Apl-003384 Anas platyrhynchos 87.00 0.00e+00 1046.00
IUUC-Aca-004962 Anolis carolinensis 83.57 0.00e+00 1012.00
IUUC-Aly-005435 Arabidopsis lyrata 28.57 2.00e-44 173.00
IUUC-Ath-006948 Arabidopsis thaliana 27.35 3.00e-45 176.00
IUUC-Ame-010915 Astyanax mexicanus 79.08 5.00e-151 526.00
IUUC-Bta-012388 Bos taurus 89.86 0.00e+00 1112.00
IUUC-Bdi-014231 Brachypodium distachyon 24.62 4.00e-36 145.00
IUUC-Bol-016174 Brassica oleracea 34.78 7.00e-45 174.00
IUUC-Bra-017165 Brassica rapa 28.27 2.00e-45 176.00
IUUC-Cel-018131 Caenorhabditis elegans 30.58 2.00e-63 236.00
IUUC-Cja-018898 Callithrix jacchus 84.62 0.00e+00 976.00
IUUC-Cfa-020484 Canis familiaris 93.22 0.00e+00 1123.00
IUUC-Csa-024019 Chlorocebus sabaeus 91.90 0.00e+00 1090.00
IUUC-Cho-024311 Choloepus hoffmanni 77.65 0.00e+00 929.00
IUUC-Cin-025260 Ciona intestinalis 37.43 1.00e-99 356.00
IUUC-Csv-025836 Ciona savignyi 43.48 5.00e-47 180.00
IUUC-Dre-027702 Danio rerio 73.17 0.00e+00 880.00
IUUC-Dno-029728 Dasypus novemcinctus 88.42 0.00e+00 1110.00
IUUC-Dor-030587 Dipodomys ordii 83.33 5.00e-114 405.00
IUUC-Dme-031595 Drosophila melanogaster 37.82 8.00e-108 384.00
IUUC-Ete-032969 Echinops telfairi 74.50 0.00e+00 757.00
IUUC-Eca-034214 Equus caballus 94.52 0.00e+00 934.00
IUUC-Eeu-034537 Erinaceus europaeus 87.36 0.00e+00 883.00
IUUC-Fca-036005 Felis catus 90.19 0.00e+00 1046.00
IUUC-Fal-037593 Ficedula albicollis 84.29 0.00e+00 979.00
IUUC-Gmo-039042 Gadus morhua 64.60 0.00e+00 673.00
IUUC-Gga-040986 Gallus gallus 84.54 0.00e+00 1048.00
IUUC-Gac-041351 Gasterosteus aculeatus 72.04 0.00e+00 890.00
IUUC-Gma-043265 Glycine max 27.97 5.00e-47 182.00
IUUC-Ggo-045427 Gorilla gorilla 91.80 0.00e+00 1113.00
IUUC-Hsa-046632 Homo sapiens 94.21 0.00e+00 1135.00
IUUC-Itr-048504 Ictidomys tridecemlineatus 92.11 0.00e+00 1096.00
IUUC-Lpe-051254 Leersia perrieri 25.84 6.00e-39 155.00
IUUC-Loc-052610 Lepisosteus oculatus 74.76 0.00e+00 903.00
IUUC-Laf-053936 Loxodonta africana 88.28 0.00e+00 1090.00
IUUC-Mcc-055504 Macaca mulatta 88.87 0.00e+00 1125.00
IUUC-Meu-056516 Macropus eugenii 80.87 0.00e+00 960.00
IUUC-Mtr-057981 Medicago truncatula 26.94 6.00e-43 168.00
IUUC-Mga-059777 Meleagris gallopavo 84.33 0.00e+00 1035.00
IUUC-Mmr-061298 Microcebus murinus 93.24 0.00e+00 1125.00
IUUC-Mdo-062969 Monodelphis domestica 85.67 0.00e+00 1042.00
IUUC-Mmu-064076 Mus musculus 91.80 0.00e+00 1106.00
IUUC-Mac-065161 Musa acuminata 26.31 4.00e-39 155.00
IUUC-Mpu-066196 Mustela putorius furo 91.30 0.00e+00 1102.00
IUUC-Mlu-067651 Myotis lucifugus 91.91 0.00e+00 1106.00
IUUC-Nle-069853 Nomascus leucogenys 92.73 0.00e+00 1114.00
IUUC-Opr-070350 Ochotona princeps 95.71 3.00e-121 429.00
IUUC-Ont-072489 Oreochromis niloticus 72.37 0.00e+00 880.00
IUUC-Oan-072703 Ornithorhynchus anatinus 79.61 0.00e+00 951.00
IUUC-Ocu-074205 Oryctolagus cuniculus 90.21 0.00e+00 1124.00
IUUC-Oba-075619 Oryza barthii 25.50 8.00e-39 154.00
IUUC-Obr-076632 Oryza brachyantha 29.79 5.00e-37 148.00
IUUC-Ogl-077671 Oryza glaberrima 25.50 6.00e-39 155.00
IUUC-Ogu-078052 Oryza glumaepatula 25.70 5.00e-39 155.00
IUUC-Oin-079611 Oryza indica 25.30 1.00e-36 147.00
IUUC-Olo-080408 Oryza longistaminata 26.91 2.00e-36 147.00
IUUC-Ome-081560 Oryza meridionalis 25.70 4.00e-39 155.00
IUUC-Oni-082145 Oryza nivara 25.50 8.00e-39 154.00
IUUC-Opu-083918 Oryza punctata 27.09 7.00e-36 145.00
IUUC-Oru-084858 Oryza rufipogon 25.30 1.00e-36 147.00
IUUC-Osa-086277 Oryza sativa 25.30 9.00e-37 147.00
IUUC-Ola-086816 Oryzias latipes 69.34 3.00e-100 357.00
IUUC-Olu-087622 Ostreococcus lucimarinus 33.44 5.00e-44 171.00
IUUC-Oga-088765 Otolemur garnettii 89.77 0.00e+00 1037.00
IUUC-Oar-090196 Ovis aries 86.93 0.00e+00 975.00
IUUC-Ptr-091676 Pan troglodytes 94.38 0.00e+00 1137.00
IUUC-Pan-092068 Papio anubis 92.44 0.00e+00 1115.00
IUUC-Psi-093367 Pelodiscus sinensis 86.28 0.00e+00 1024.00
IUUC-Ppa-095699 Physcomitrella patens 33.44 1.00e-40 160.00
IUUC-Pfo-096067 Poecilia formosa 72.82 0.00e+00 866.00
IUUC-Pab-098111 Pongo abelii 92.12 0.00e+00 1116.00
IUUC-Pop-099116 Populus trichocarpa 26.59 2.00e-44 173.00
IUUC-Pca-100680 Procavia capensis 79.97 0.00e+00 914.00
IUUC-Ppe-101790 Prunus persica 25.62 2.00e-44 173.00
IUUC-Pva-102871 Pteropus vampyrus 88.40 0.00e+00 1019.00
IUUC-Rno-106088 Rattus norvegicus 91.48 0.00e+00 1101.00
IUUC-Sha-106984 Sarcophilus harrisii 88.04 0.00e+00 1048.00
IUUC-Smo-109404 Selaginella moellendorffii 25.87 2.00e-41 163.00
IUUC-Sit-110828 Setaria italica 27.54 2.00e-43 170.00
IUUC-Sly-111009 Solanum lycopersicum 26.50 2.00e-46 179.00
IUUC-Stu-112370 Solanum tuberosum 26.89 3.00e-47 182.00
IUUC-Sar-113659 Sorex araneus 63.30 3.00e-91 327.00
IUUC-Sbi-114819 Sorghum bicolor 27.23 2.00e-40 160.00
IUUC-Ssc-116241 Sus scrofa 90.42 0.00e+00 1082.00
IUUC-Tgu-116576 Taeniopygia guttata 87.27 0.00e+00 1073.00
IUUC-Tru-118336 Takifugu rubripes 64.53 0.00e+00 733.00
IUUC-Tsy-119006 Tarsius syrichta 87.92 0.00e+00 1053.00
IUUC-Tni-120300 Tetraodon nigroviridis 74.16 0.00e+00 867.00
IUUC-Tca-121002 Theobroma cacao 27.51 1.00e-47 184.00
IUUC-Tae-124868 Triticum aestivum 24.31 9.00e-34 138.00
IUUC-Tur-126463 Triticum urartu 23.72 1.00e-32 135.00
IUUC-Tbe-127631 Tupaia belangeri 94.55 0.00e+00 910.00
IUUC-Ttr-129005 Tursiops truncatus 81.11 2.00e-157 548.00
IUUC-Vpa-130246 Vicugna pacos 82.44 0.00e+00 819.00
IUUC-Vvi-130878 Vitis vinifera 26.52 7.00e-43 168.00
IUUC-Xtr-132798 Xenopus tropicalis 73.93 0.00e+00 856.00
IUUC-Xma-133264 Xiphophorus maculatus 72.77 0.00e+00 870.00
Created Date 25-Jun-2017

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