iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111601

Ensembl Protein ID

Solyc12g042200.1.1

UniProt Accession

K4DF14; K4DF14_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc12g042200.1	Solyc12g042200.1.1	Solyc12g042200.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.50e-09	37.4	513	537

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 8    claf.sd.tllvsGsdDgtikvWDlr 31
             a+ +d  ++ sGs D +i+++D+r
   Q: 513  Q-AWsPDgLYITSGSVDPVIHIFDIR 537
           4.69999999**************86 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MNKPPNPKTV NGEEDNGRRM EEQDRKEQEE ALIALIEHRT KEVEHLRQRL TYYKSQYHEA 60
ENRLEETQLK LARLRGRENI AASTSSRGNG ENPMTSKRRS TSPIQINEGP FHSLSESKRH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAATAAAC CTCCGAACCC CAAAACTGTA AACGGCGAAG AAGATAATGG AAGAAGAATG 60
GAAGAGCAAG ATAGAAAGGA GCAAGAAGAA GCACTTATCG CTCTCATTGA ACATCGTACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

sly:101251159

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000679	Aegilops tauschii	55.04	5.00e-127	446.00
IUUC-Atr-002878	Amborella trichopoda	55.21	6.00e-138	483.00
IUUC-Aly-006473	Arabidopsis lyrata	68.39	1.00e-155	542.00
IUUC-Ath-006806	Arabidopsis thaliana	68.94	5.00e-157	546.00
IUUC-Bdi-014216	Brachypodium distachyon	63.29	2.00e-133	468.00
IUUC-Bol-015463	Brassica oleracea	64.04	6.00e-158	549.00
IUUC-Bra-017074	Brassica rapa	67.81	2.00e-158	551.00
IUUC-Gma-042665	Glycine max	59.80	0.00e+00	682.00
IUUC-Hvu-047292	Hordeum vulgare	63.70	1.00e-111	394.00
IUUC-Lpe-051627	Leersia perrieri	62.75	7.00e-134	469.00
IUUC-Mtr-058789	Medicago truncatula	57.31	6.00e-173	599.00
IUUC-Mac-065472	Musa acuminata	54.17	2.00e-172	598.00
IUUC-Oba-074995	Oryza barthii	61.54	3.00e-134	471.00
IUUC-Obr-076006	Oryza brachyantha	47.25	1.00e-135	475.00
IUUC-Ogl-077176	Oryza glaberrima	64.71	3.00e-137	481.00
IUUC-Ogu-078267	Oryza glumaepatula	64.71	4.00e-137	480.00
IUUC-Oin-079742	Oryza indica	64.71	1.00e-136	479.00
IUUC-Olo-080890	Oryza longistaminata	62.36	2.00e-123	434.00
IUUC-Ome-081454	Oryza meridionalis	64.71	2.00e-137	481.00
IUUC-Oni-083009	Oryza nivara	61.54	2.00e-134	471.00
IUUC-Opu-083781	Oryza punctata	64.94	2.00e-134	471.00
IUUC-Oru-084517	Oryza rufipogon	61.54	2.00e-134	471.00
IUUC-Osa-085484	Oryza sativa	64.71	1.00e-136	478.00
IUUC-Ppa-095859	Physcomitrella patens	38.45	9.00e-101	359.00
IUUC-Pop-099926	Populus trichocarpa	56.78	3.00e-177	613.00
IUUC-Ppe-101833	Prunus persica	61.13	0.00e+00	694.00
IUUC-Smo-109600	Selaginella moellendorffii	35.90	2.00e-42	165.00
IUUC-Sit-109887	Setaria italica	64.96	2.00e-138	484.00
IUUC-Stu-112708	Solanum tuberosum	66.37	0.00e+00	716.00
IUUC-Sbi-114727	Sorghum bicolor	64.39	1.00e-137	482.00
IUUC-Tca-121644	Theobroma cacao	60.67	0.00e+00	653.00
IUUC-Tae-125240	Triticum aestivum	60.78	6.00e-135	473.00
IUUC-Vvi-131460	Vitis vinifera	58.59	0.00e+00	660.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence