iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-109600

Ensembl Protein ID

EFJ06641

UniProt Accession

D8T9J5; D8T9J5_SELML

Genbank Protein ID

EFJ06641.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377696

Gene Name

SELMODRAFT_134995

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_134995	EFJ06641	EFJ06641

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.90e-07	30.3	63	93

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf.....sd.tllvsGsdDgtikvWD 29
             ++++f     s+ + +++G+dD+++ +W 
   Q: 63   LLRSIKFmpwqvSGaPCFATGGDDHSVVLWK 93
           56788888889888899*************7 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MTSICSAHLH ECPQDMEWHP DGNRLFAAFK STGRAQVGYY DLSDDVSALR FRLLPGEPHC 60
TGLLRSIKFM PWQVSGAPCF ATGGDDHSVV LWKESQEHWT SQKLYNSHSS FVYGVAGAAH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACAAGCA TTTGCAGCGC TCACTTACAT GAGTGTCCTC AGGATATGGA GTGGCACCCG 60
GATGGCAACA GACTGTTTGC AGCGTTCAAG AGCACCGGTC GGGCTCAAGT TGGATACTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

smo:SELMODRAFT_134995

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002878	Amborella trichopoda	35.80	3.00e-41	162.00
IUUC-Aly-006473	Arabidopsis lyrata	36.90	2.00e-42	166.00
IUUC-Bdi-014216	Brachypodium distachyon	35.69	1.00e-42	167.00
IUUC-Gma-042665	Glycine max	36.29	8.00e-44	171.00
IUUC-Lpe-051627	Leersia perrieri	38.61	2.00e-43	169.00
IUUC-Mac-065472	Musa acuminata	37.50	1.00e-43	170.00
IUUC-Oba-074995	Oryza barthii	36.68	4.00e-42	165.00
IUUC-Obr-076006	Oryza brachyantha	36.68	8.00e-42	164.00
IUUC-Ogu-078267	Oryza glumaepatula	36.68	5.00e-42	164.00
IUUC-Olo-080890	Oryza longistaminata	34.88	1.00e-38	153.00
IUUC-Opu-083781	Oryza punctata	36.92	1.00e-42	166.00
IUUC-Osa-085484	Oryza sativa	36.68	3.00e-42	165.00
IUUC-Pop-099647	Populus trichocarpa	38.96	6.00e-44	171.00
IUUC-Ppe-101833	Prunus persica	37.75	5.00e-44	171.00
IUUC-Sit-109887	Setaria italica	38.28	7.00e-45	174.00
IUUC-Sly-111601	Solanum lycopersicum	35.90	4.00e-42	165.00
IUUC-Stu-112708	Solanum tuberosum	35.13	3.00e-44	172.00
IUUC-Sbi-114727	Sorghum bicolor	37.85	2.00e-43	169.00
IUUC-Tca-121644	Theobroma cacao	38.46	3.00e-46	179.00
IUUC-Tae-125240	Triticum aestivum	36.19	8.00e-43	167.00
IUUC-Vvi-131460	Vitis vinifera	37.60	6.00e-45	174.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence