iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112271

Ensembl Protein ID

PGSC0003DMT400013474

UniProt Accession

M1A2W4; M1A2W4_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400005257	PGSC0003DMT400013474	PGSC0003DMT400013474

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.00e-20	72.7	265	294
UBD/Beta-Prp	1.10e-39	137.6	159	353

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H ++v+++++ s+ + l+sG++D+ +++WD
   Q: 265  HRGEVCGVKWsSTgNALASGGNDNLVYIWD 294
           99********9777**************** PP

UBD/Beta-Prp

   S: 30   rdgtikvwdvttgkl..lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdr 116
             + + +w+++ +k+  l +++  ++  t+v +s dgki + g +   +++wd +t+  v+ l+gh+++v ++s++   + l sGs+dr
   Q: 159  LGSILYIWNAQVQKAgvLMEVKRENDCPTSVAWSADGKIVAVGCDSSKLQLWDAETSRLVRDLQGHQSRVGCVSWNG--HILTSGSKDR 245
           35566788888888777666666666678888999988877777778899999999999999999999999999988..8888999999 PP
   S: 117  tirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl...ktgkllrtltgghtdsvyslsfdsngkelvs.gs.. 199
            i   d++ ++ l ++ + h+g v++v+++++gn l+sG++D+ v +Wd+   ++   ++++ + h+ +v+ l++ + + ++++ g+  
   Q: 246  AIINHDVRARSNLVSVTRAHRGEVCGVKWSSTGNALASGGNDNLVYIWDSfktSSRHYMHRFNE-HHAAVKALAWCPYSSDVLAsGGgi 333
           9999999999998889999999999999999999999999999999999888888888888887.889999988777665554413333 PP
   S: 200  ldgtvklwdlqtgecvrtln 219
           +dg +k+w+ q+g+c+ t +
   Q: 334  DDGCLKIWNTQKGTCISTNE 353
           78899999999999887754 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MNDNSLTRIQ PDWYSPTRLH DTPLDNDFPG DRFIPNRSLM DLDQAHTLLT NRTNNKLRKP 60
NFNDEYRRKM EENLKLDVEG RPFRMLVFRG SPKSSRQSTR LIDEMRRSDK EIPLQINENR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAATGACA ATTCATTAAC AAGAATTCAA CCAGATTGGT ATTCTCCAAC TCGCCTTCAC 60
GATACTCCGC TCGACAATGA TTTTCCTGTA ATTAATCAAT CCACACTATG CGTTTTTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-043406	Glycine max	57.23	6.00e-159	552.00
IUUC-Mtr-057975	Medicago truncatula	57.08	3.00e-148	516.00
IUUC-Mac-064491	Musa acuminata	49.77	1.00e-111	395.00
IUUC-Pop-099291	Populus trichocarpa	55.09	7.00e-143	499.00
IUUC-Ppe-101170	Prunus persica	55.30	7.00e-139	485.00
IUUC-Sly-111334	Solanum lycopersicum	92.02	0.00e+00	904.00
IUUC-Tca-120916	Theobroma cacao	58.12	7.00e-162	563.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence