iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121658

Ensembl Protein ID

EOY23072

UniProt Accession

A0A061G1I4; A0A061G1I4_THECC

Genbank Protein ID

EOY23072.1

Protein Name

Zinc finger WD40 repeat protein 1 isoform 1

Genbank Nucleotide ID

CM001881

Gene Name

TCM_015076

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_015076	EOY23073	EOY23073
TCM_015076	EOY23072	EOY23072

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-19	70.3	144	182

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+  v+++a+  + + l +Gs D t++ WD+ +g +++
   Q: 144  GHQKVVSGIALpAGlDKLYTGSKDETVRAWDTNSGQCTC 182
           899********855789******************9986 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MDLDGGNRRV FNRLGGPSTA PTDSSKHQKV CYHWRAGKCN RFPCPFLHRE LPAPGPAATA 60
NGSGAPKRFA DDSGFSGPAA RRGPNFNNNH HNSWGRMGAN KVVRKTEKVC NYWVQGNCNY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTCGTTCCC AAAAGCAGTC TCTTTTTTCA CTTTACTCTC AATTTTTACA GCACCAAGGG 60
CGACGGGCCT TAGTCCGATT TAGGGTTTGC GCGATCTCTT TCATGATCGG ATTCTTTGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0853--WD repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR000571--Znf_CCCH

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS50103--ZF_C3H1

Pfam

PF00400--WD40
PF00642--zf-CCCH

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40
SM00356--ZnF_C3H1

Gene Ontology

GO:0046872--F:metal ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000399	Aegilops tauschii	43.36	4.00e-72	264.00
IUUC-Atr-002831	Amborella trichopoda	56.03	4.00e-143	499.00
IUUC-Aly-005699	Arabidopsis lyrata	66.81	7.00e-180	622.00
IUUC-Ath-007001	Arabidopsis thaliana	66.81	2.00e-180	624.00
IUUC-Bdi-014857	Brachypodium distachyon	57.24	3.00e-143	500.00
IUUC-Bol-016382	Brassica oleracea	65.19	1.00e-172	598.00
IUUC-Bra-017102	Brassica rapa	65.48	7.00e-171	592.00
IUUC-Gma-044355	Glycine max	65.86	5.00e-165	572.00
IUUC-Hvu-047824	Hordeum vulgare	59.94	1.00e-114	405.00
IUUC-Lpe-051596	Leersia perrieri	52.14	7.00e-122	429.00
IUUC-Mtr-058068	Medicago truncatula	62.58	2.00e-157	548.00
IUUC-Mac-065071	Musa acuminata	62.61	5.00e-158	550.00
IUUC-Oba-075769	Oryza barthii	53.32	3.00e-122	430.00
IUUC-Obr-076011	Oryza brachyantha	60.63	2.00e-151	527.00
IUUC-Ogl-077192	Oryza glaberrima	50.39	3.00e-73	267.00
IUUC-Ogu-078248	Oryza glumaepatula	52.60	6.00e-124	436.00
IUUC-Oin-079981	Oryza indica	60.14	3.00e-149	520.00
IUUC-Olo-080571	Oryza longistaminata	52.35	1.00e-115	409.00
IUUC-Ome-081598	Oryza meridionalis	53.15	3.00e-123	433.00
IUUC-Oni-082711	Oryza nivara	53.15	2.00e-123	434.00
IUUC-Opu-083451	Oryza punctata	56.41	1.00e-145	508.00
IUUC-Oru-085129	Oryza rufipogon	53.32	5.00e-122	430.00
IUUC-Osa-085619	Oryza sativa	58.93	1.00e-108	385.00
IUUC-Ppa-096012	Physcomitrella patens	52.63	1.00e-101	362.00
IUUC-Pop-099994	Populus trichocarpa	68.48	2.00e-174	604.00
IUUC-Ppe-101609	Prunus persica	72.91	0.00e+00	663.00
IUUC-Smo-108900	Selaginella moellendorffii	43.82	2.00e-94	338.00
IUUC-Sit-109731	Setaria italica	57.99	3.00e-139	487.00
IUUC-Sly-111514	Solanum lycopersicum	62.28	6.00e-158	549.00
IUUC-Stu-112646	Solanum tuberosum	62.39	2.00e-162	564.00
IUUC-Sbi-114748	Sorghum bicolor	55.77	8.00e-141	492.00
IUUC-Tae-125577	Triticum aestivum	57.98	2.00e-144	504.00
IUUC-Tur-126095	Triticum urartu	54.55	4.00e-84	305.00
IUUC-Vvi-131444	Vitis vinifera	67.31	4.00e-180	623.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence