iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099589

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000351

Gene Name

POPTRDRAFT_574790; POPTR_0015s01980g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0015s01980	POPTR_0015s01980.1	POPTR_0015s01980.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.30e-06	29.9	331	373

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+++  ++ +++ p C+H+fh dC+  w       + +++CP+Cr
   Q: 331  CSICLCEYkpMETLKTIPeCKHCFHSDCIDEW------LRLNASCPICR 373
           ******9977554777779*************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MVYSLKVISS ISLFLTMISY LNIATSQNLC LRTACNRSEP VIRFPFRIQN RQSKACGYPG 60
FDISCGSSNE TMLELHSSGK FVVQAIDYAT QEIWINDQGN CLADRILSLN LFGSPFIGLY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGTACT CTCTCAAAGT CATCTCCTCC ATCTCCCTCT TCCTTACCAT GATCTCCTAT 60
CTAAACATTG CAACAAGTCA AAACCTTTGC TTGAGGACTG CTTGTAACCG CAGCGAGCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR032872--WAK_assoc_C
IPR025287--WAK_GUB
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13947--GUB_WAK_bind
PF14380--WAK_assoc
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0030247--F:polysaccharide binding
GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0015s01980g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006768	Arabidopsis thaliana	54.19	9.00e-104	369.00
IUUC-Bol-016427	Brassica oleracea	52.34	2.00e-103	368.00
IUUC-Bra-017394	Brassica rapa	52.82	2.00e-100	358.00
IUUC-Gma-043445	Glycine max	47.23	2.00e-89	322.00
IUUC-Mtr-057786	Medicago truncatula	48.51	3.00e-93	334.00
IUUC-Ppe-101955	Prunus persica	52.42	5.00e-87	313.00
IUUC-Sly-111586	Solanum lycopersicum	53.97	7.00e-106	376.00
IUUC-Stu-112594	Solanum tuberosum	56.81	2.00e-103	368.00
IUUC-Tca-120919	Theobroma cacao	62.05	3.00e-121	427.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence