iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095823

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S3_505V6	PP1S3_505V6.1	PP1S3_505V6.1
PP1S3_505V6	PP1S3_505V6.3	PP1S3_505V6.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-06	28.2	133	171

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.........sdtl....lvsGsdDgtikvWD 29
           H+++ t +++         +       l++Gs Dg++k+W+
   Q: 133  HKSWLTTFSWgtrscikdtT--EdtvvLATGSSDGSVKLWS 171
           9***********99997652..133459************7 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MRTEKGSVCL DAHEVLQSNR GRNLEIRLLC RRTNSYNSLP SDDAVSPSGQ HSGSSRRSSF 60
ITPKEYTERD YSLSPLVIAW SPTCYVNDRG LVLCAVGTKA GSVWLLRVAL PEYYSVEKSV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TACTCAAGGG AGCTCTCACT TATTTTCATG TATGAAATTT CCGTGCAAAA CTAGCAAAAT 60
AATACTCTTG CTCAAGGTCA CTGTTGAAGT GATTAGATTA CTCAAGTAAA GAAATAAGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003046	Amborella trichopoda	35.76	9.00e-60	224.00
IUUC-Aly-005715	Arabidopsis lyrata	33.90	2.00e-74	273.00
IUUC-Ath-007637	Arabidopsis thaliana	33.57	1.00e-85	310.00
IUUC-Bdi-014902	Brachypodium distachyon	31.89	1.00e-71	263.00
IUUC-Bol-016169	Brassica oleracea	34.17	5.00e-75	275.00
IUUC-Bra-017736	Brassica rapa	34.16	5.00e-80	291.00
IUUC-Gma-044065	Glycine max	30.00	3.00e-73	269.00
IUUC-Mtr-057870	Medicago truncatula	30.54	2.00e-71	263.00
IUUC-Mac-065235	Musa acuminata	36.32	3.00e-58	219.00
IUUC-Ogl-077286	Oryza glaberrima	32.02	7.00e-78	284.00
IUUC-Oin-079863	Oryza indica	31.87	7.00e-78	284.00
IUUC-Oru-084242	Oryza rufipogon	30.12	3.00e-67	249.00
IUUC-Osa-085660	Oryza sativa	32.02	4.00e-78	285.00
IUUC-Pop-098900	Populus trichocarpa	34.19	3.00e-92	332.00
IUUC-Ppe-101763	Prunus persica	31.34	5.00e-76	278.00
IUUC-Smo-108757	Selaginella moellendorffii	36.70	3.00e-100	358.00
IUUC-Sit-110507	Setaria italica	32.02	1.00e-52	201.00
IUUC-Sly-111401	Solanum lycopersicum	32.40	4.00e-79	288.00
IUUC-Stu-112879	Solanum tuberosum	37.20	4.00e-31	128.00
IUUC-Tca-121440	Theobroma cacao	32.74	8.00e-90	324.00
IUUC-Tae-124422	Triticum aestivum	30.56	3.00e-67	249.00
IUUC-Vvi-131537	Vitis vinifera	34.38	2.00e-80	293.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence