iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099395

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000347

Gene Name

POPTRDRAFT_569229; POPTR_0011s15100g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0011s15100	POPTR_0011s15100.1	POPTR_0011s15100.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.00e-09	38.9	127	169

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplv.lpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl++f   +g +v ++C+H fh +C++kw         + +CP+Cr
   Q: 127  CAICLSEFveGEGIRVlGRCNHGFHVHCVEKW------LASHSSCPTCR 169
           ********66333444177*************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MRPAPLETTA AADISHLSPP PPLPSRPPSC DPQVHSCKWW PYSNSNDAGA NTATILMILL 60
CALICALAFN TAIRWFLRSD NDSSSDHLRE LEEQRKPNKE SDMALLVLAT TQVYYAGMKL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGACCAG CACCATTAGA AACAACAGCA GCAGCAGACA TCAGCCATCT ATCCCCACCA 60
CCACCACTCC CTTCTAGACC TCCATCATGT GACCCTCAAG TTCACAGCTG CAAATGGTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0011s15100g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-015810	Brassica oleracea	47.54	5.00e-24	102.00
IUUC-Bra-018017	Brassica rapa	48.36	5.00e-25	106.00
IUUC-Tca-121529	Theobroma cacao	50.29	1.00e-40	159.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence