iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111162

Ensembl Protein ID

Solyc08g082900.2.1

UniProt Accession

K4CPT6; K4CPT6_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc08g082900.2	Solyc08g082900.2.1	Solyc08g082900.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-23	81.9	417	449

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlr 31
           H++ vtc++f   +d++++sGs Dg+i++W+++
   Q: 417  HNNYVTCVEFnpiDDNIFISGSIDGKIRLWEVH 449
           999*********999****************86 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MGSYSEFEEE CFFDSREEIT SVSDLGSDCN ETCVRSLGDE CVLGYDLWNK DPESVDERRD 60
RFLKWIGLSS SWDGPDGKEK GGITTHYRKM SVDRIRDVGE TVLANSDSQE SCFSGRSSQS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGAGTT ATAGTGAGTT TGAAGAAGAA TGTTTCTTTG ATAGCCGTGA AGAGATTACT 60
TCTGTTTCTG ATTTGGGTTC TGATTGCAAT GAGACATGTG TTCGTAGTTT GGGTGACGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000343	Aegilops tauschii	46.88	2.00e-123	435.00
IUUC-Atr-002755	Amborella trichopoda	47.04	0.00e+00	637.00
IUUC-Gma-042979	Glycine max	50.75	0.00e+00	645.00
IUUC-Lpe-051594	Leersia perrieri	38.08	9.00e-107	380.00
IUUC-Mtr-058554	Medicago truncatula	47.81	0.00e+00	633.00
IUUC-Obr-076256	Oryza brachyantha	41.25	3.00e-130	458.00
IUUC-Ome-081177	Oryza meridionalis	40.22	2.00e-139	489.00
IUUC-Opu-083616	Oryza punctata	39.34	4.00e-124	438.00
IUUC-Pop-099922	Populus trichocarpa	53.04	0.00e+00	698.00
IUUC-Ppe-101343	Prunus persica	50.13	0.00e+00	682.00
IUUC-Sit-110689	Setaria italica	41.81	7.00e-138	483.00
IUUC-Stu-112019	Solanum tuberosum	94.86	0.00e+00	1416.00
IUUC-Sbi-114128	Sorghum bicolor	41.25	5.00e-140	490.00
IUUC-Tca-121771	Theobroma cacao	52.51	0.00e+00	677.00
IUUC-Tae-122963	Triticum aestivum	43.09	2.00e-133	469.00
IUUC-Tur-126616	Triticum urartu	43.38	9.00e-127	447.00
IUUC-Vvi-130998	Vitis vinifera	52.37	0.00e+00	699.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence