iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114789

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G275400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g031240	Sb04g031240.1	Sb04g031240.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.60e-08	33.6	161	203

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl +f+dg  +++lp C H+fh+ C+  w       + + +CPlCr
   Q: 161  CSVCLGEFRDGesLRLLPkCSHAFHLPCIDTW------LKSHSNCPLCR 203
           ********7766699999**************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAAVASSSPP ATIAGPQPTW VPYEPTRDCS QGLCSMYCPQ WCYFIFPPPP PAFDIAGPGS 60
GDDSSGPTFS PLVIAIIGVL ASAFLLVSYY TIISKYCGTF SSLRNMLFGP RRGRGGVGGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGGAAAAGA AAATGAAAGC AGAGCGGCAG CGTCGGGCCC AGCCCCCAAC CACCACCATC 60
TTCTCCTTCC CCCTCCCCGT CAGCTTCTAC CACTCGCGAA ATACTTTGCT TTACAAGCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_04g031240

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002971	Amborella trichopoda	57.59	9.00e-58	216.00
IUUC-Aly-006095	Arabidopsis lyrata	45.31	1.00e-45	176.00
IUUC-Ath-006705	Arabidopsis thaliana	42.49	1.00e-51	196.00
IUUC-Bdi-014160	Brachypodium distachyon	65.66	1.00e-125	441.00
IUUC-Bol-015911	Brassica oleracea	44.49	2.00e-43	168.00
IUUC-Bra-017763	Brassica rapa	54.68	2.00e-41	162.00
IUUC-Cne-026941	Cryptococcus neoformans	33.78	1.00e-09	57.40
IUUC-Gma-042838	Glycine max	47.00	8.00e-62	229.00
IUUC-Hvu-047701	Hordeum vulgare	70.19	1.00e-117	415.00
IUUC-Lpe-051459	Leersia perrieri	71.39	2.00e-134	471.00
IUUC-Mtr-058411	Medicago truncatula	44.06	5.00e-61	227.00
IUUC-Mac-065580	Musa acuminata	46.88	7.00e-77	280.00
IUUC-Oba-075056	Oryza barthii	70.38	1.00e-123	435.00
IUUC-Obr-076483	Oryza brachyantha	65.51	1.00e-120	425.00
IUUC-Ogl-077644	Oryza glaberrima	70.60	2.00e-125	441.00
IUUC-Ogu-078989	Oryza glumaepatula	69.87	2.00e-123	434.00
IUUC-Oin-079716	Oryza indica	70.38	1.00e-123	435.00
IUUC-Olo-081066	Oryza longistaminata	72.47	1.00e-127	448.00
IUUC-Ome-081279	Oryza meridionalis	71.43	3.00e-120	424.00
IUUC-Oni-082896	Oryza nivara	70.38	1.00e-123	435.00
IUUC-Opu-083796	Oryza punctata	71.18	2.00e-121	427.00
IUUC-Oru-084594	Oryza rufipogon	70.13	4.00e-123	433.00
IUUC-Osa-086004	Oryza sativa	70.35	6.00e-125	439.00
IUUC-Ppa-095182	Physcomitrella patens	54.73	4.00e-30	125.00
IUUC-Pop-099246	Populus trichocarpa	41.42	2.00e-61	228.00
IUUC-Ppe-101720	Prunus persica	40.31	7.00e-67	246.00
IUUC-Sit-109894	Setaria italica	79.06	3.00e-136	477.00
IUUC-Sly-110835	Solanum lycopersicum	39.63	4.00e-54	204.00
IUUC-Stu-112220	Solanum tuberosum	40.32	1.00e-56	213.00
IUUC-Tca-121189	Theobroma cacao	41.75	3.00e-65	241.00
IUUC-Tae-123315	Triticum aestivum	68.23	2.00e-114	404.00
IUUC-Vvi-130829	Vitis vinifera	56.15	2.00e-45	175.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence