iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005458

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin-specific protease 21

Genbank Nucleotide ID

GL348720

Gene Name

UBP21; ARALYDRAFT_916754

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_800154.1	scaffold_800154.1	scaffold_800154.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.80e-74	251.0	143	447

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDa 92
           Gl N gNtC++ SvLQc +++ +l e l +  +++ +n     ++k +++++l++ +e  + s+ + ++  ++ + l ++++ f  ++q+Da
   Q: 143  GLYNSGNTCFIASVLQCFTHTVPLIESLRSyMYQNPCNC---GNEKFCVMQALRDHIELALRSSGHGINIDRFRDNLTHFSSDFMINHQEDA 231
           9****************************9655555654...5789********************************************** PP
   S: 93   qEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkk 184
           +Efl+ +ld+le+ +                   +++++ +  ++  ++++++F+g l s++ c +c++vs+++ep l  sl++++ +    
   Q: 232  HEFLQSFLDKLERCC-----------------LDPKNEPGSILSQDMNIVDNVFGGGLMSTLCCCNCNSVSNTFEPSLGWSLEIEDVD---- 302
           ***************.................224446778899999*****************************************.... PP
   S: 185  eslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekk 276
            +l ++Lesft+ e+le+  ++ c++ck+k++ ek+lk+++lP+v ++hLkRf  ++++   eki+++vefpleLdl pf++s++ + ++++
   Q: 303  -NLWSALESFTRVEKLED--QLTCDNCKEKVTKEKQLKFDQLPPVATFHLKRF--KNDGVTMEKIFEHVEFPLELDLLPFMSSNQ-NPEVST 388
           .9**************95..8********************************..67778999********************55.5568** PP
   S: 277  kYeLiavvvHsG.slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           kY L+a v H G ++  GHY +yv++  + W +fdDskVt ++e++vl+   + aY+lfY r
   Q: 389  KYHLYAFVEHIGiGATFGHYSTYVRSAPETWHNFDDSKVTRISEDRVLS---RPAYILFYAR 447
           **************************999********************...********87 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MAEFSDPPPS NLSSSPKLAK PNQTLDESTP TAPIRDLVTH SLSLSSPIRQ IQPSSPANAD 60
ESSSSPSDKT LTTPPAQISP VSNNNFLQIT STSDSYLYRP PRRYIENSDG QSDDDDLNKI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCCGATCTGG GTTTCGTTGT TAATGGCGGA ATTTAGTGAC CCACCACCTT CAAATCTCTC 60
TTCTTCTCCT AAATTAGCTA AACCCAACCA AACCCTAGAT GAGTCCACAC CAACCGCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0645--Protease
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

aly:ARALYDRAFT_916754

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000766	Aegilops tauschii	43.16	7.00e-74	271.00
IUUC-Atr-002708	Amborella trichopoda	45.54	1.00e-81	297.00
IUUC-Ath-007509	Arabidopsis thaliana	82.08	0.00e+00	1180.00
IUUC-Bdi-014605	Brachypodium distachyon	46.44	9.00e-63	233.00
IUUC-Bol-015756	Brassica oleracea	60.11	0.00e+00	789.00
IUUC-Bra-017084	Brassica rapa	58.74	0.00e+00	757.00
IUUC-Hvu-047714	Hordeum vulgare	45.97	5.00e-86	311.00
IUUC-Lpe-051429	Leersia perrieri	41.72	8.00e-62	230.00
IUUC-Mac-065610	Musa acuminata	46.24	1.00e-78	286.00
IUUC-Oba-075717	Oryza barthii	39.75	1.00e-77	283.00
IUUC-Ogl-077443	Oryza glaberrima	37.94	3.00e-63	235.00
IUUC-Ogu-078191	Oryza glumaepatula	39.30	9.00e-73	267.00
IUUC-Oin-079634	Oryza indica	39.30	8.00e-73	267.00
IUUC-Ome-081886	Oryza meridionalis	39.80	3.00e-57	216.00
IUUC-Oni-082505	Oryza nivara	39.92	4.00e-74	271.00
IUUC-Opu-083445	Oryza punctata	40.27	4.00e-58	218.00
IUUC-Oru-085176	Oryza rufipogon	37.22	4.00e-58	218.00
IUUC-Ppe-101932	Prunus persica	51.77	4.00e-106	377.00
IUUC-Sbi-114738	Sorghum bicolor	40.19	8.00e-58	216.00
IUUC-Tca-120971	Theobroma cacao	47.12	1.00e-106	380.00
IUUC-Tae-125005	Triticum aestivum	44.28	4.00e-85	308.00
IUUC-Tur-126591	Triticum urartu	44.60	4.00e-60	225.00
IUUC-Vvi-131459	Vitis vinifera	54.95	4.00e-92	331.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence