iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099906

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

UBIQUITIN-SPECIFIC PROTEASE 21 family protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_590014; POPTR_0001s02420g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s02420	POPTR_0001s02420.1	POPTR_0001s02420.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.50e-77	262.1	277	582

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 3    lkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenp.kepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDa 92
           l N gNtCY+N++LQc +++ +l ++l +     +n+e p  ++  ++l+ l++ +e  ++s+ k  +p +l++ l+++++ f+ y+q+Da
   Q: 277  LFNKGNTCYINAILQCFTHTVPLVQALRS-----CNHEMPcITEGFCVLCVLRDHIELSLSSSGKILEPLKLVNNLENISSVFRRYQQEDA 362
           569**************************.....5555551345669**********999******************************* PP
   S: 93   qEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetk 183
           +Efl++ll++le+++                   s+  +++  ++ k++++++F+g+l s+++c +c++ s ++ep +dlsl++++ +   
   Q: 363  HEFLQCLLERLERHC-----------------LDSSLTDDSASSHDKNIVERVFGGRLVSKLRCCNCGHCSDKYEPLIDLSLEIEDAD--- 433
           ***************.................12334567899999******************************************... PP
   S: 184  keslqdcLesftkeeelegenk.yycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqk 273
             slq++Lesftk e++e+++  + ce+ck+++  ek+l+l++ P v  lhLk f+ +    s eki k+v+fpleLdl+p+++++e++++
   Q: 434  --SLQSALESFTKVEKIEDSETkFTCESCKEEVSREKQLMLDQAPSVAALHLKIFKIDG--TSVEKIGKHVQFPLELDLKPYTNDNEDSDE 520
           ..9**************987644********************************8877..5889************************** PP
   S: 274  ekkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           +  kY+L+avvvH+G sl sGHY++y++++ + W ++dD +V++ +ee vl+   + aY+lfY r
   Q: 521  VGFKYQLYAVVVHKGdSLMSGHYFCYIRSSPDTWHKLDDPEVSKEQEEFVLS---QAAYILFYAR 582
           ****************************************************...********87 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MEVSTEAAVD VFSLPSKIES LESKSLIVAD GFSSKSQVEA LNDELMEDSH EDPVNSPNSL 60
KTLPELSCGE QCLVSISSNS GGFSQISTST PQSEETLTIS LPSSHIVSPG NQISVPSQSN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGTTT CAACTGAAGC AGCCGTTGAT GTGTTTTCAT TGCCTTCTAA AATTGAATCC 60
CTAGAGTCCA AATCTCTTAT TGTTGCTGAT GGGTTTTCTT CAAAGTCTCA GGTTGAAGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0645--Protease
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0001s02420g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-044214	Glycine max	44.72	1.00e-126	446.00
IUUC-Mtr-057925	Medicago truncatula	47.38	2.00e-110	392.00
IUUC-Mac-065610	Musa acuminata	51.59	6.00e-96	344.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence