iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098866

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000353

Gene Name

POPTRDRAFT_909080; POPTR_0017s10990g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0017s10990	POPTR_0017s10990.1	POPTR_0017s10990.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.30e-18	67.1	53	124

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           e+p ef Cp+s++lM+dPv+++sG+t++r++++ +   g +   ++++  + ++ +Pnl+l+++i +wc   
   Q: 53   EIPIEFQCPVSGTLMKDPVIVSSGHTFERACVQACNTLGFTPTLMDGTVPDFSTCIPNLALKSTILEWCRNY 124
           689********************************99999988888888888888**************875 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MEFQEAVARL RIHKTIRKGA IERQHTQTEN KERKIFFHRS SSSSSKQKTR PSEIPIEFQC 60
PVSGTLMKDP VIVSSGHTFE RACVQACNTL GFTPTLMDGT VPDFSTCIPN LALKSTILEW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGTTTC AAGAAGCTGT GGCGAGGCTA AGGATCCACA AGACAATACG CAAGGGAGCT 60
ATTGAGAGAC AACACACGCA AACTGAAAAC AAAGAACGGA AAATCTTCTT TCACAGATCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0017s10990g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Mac-064760	Musa acuminata	37.23	3.00e-62	231.00
IUUC-Ogl-077033	Oryza glaberrima	34.18	3.00e-43	169.00
IUUC-Ome-081313	Oryza meridionalis	34.39	8.00e-44	171.00
IUUC-Oni-082747	Oryza nivara	35.03	2.00e-44	173.00
IUUC-Opu-084021	Oryza punctata	35.82	1.00e-49	190.00
IUUC-Oru-084445	Oryza rufipogon	35.03	8.00e-44	172.00
IUUC-Ppe-101810	Prunus persica	57.33	1.00e-140	493.00
IUUC-Sly-111131	Solanum lycopersicum	56.12	9.00e-136	476.00
IUUC-Stu-112864	Solanum tuberosum	56.96	6.00e-130	456.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence