iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-130929

UUCD1 version

UUC-ViV-00909

Ensembl Protein ID

VIT_14s0066g01450.t01

UniProt Accession

F6HV03; F6HV03_VITVI

Genbank Protein ID

CCB58521.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596252

Gene Name

VIT_14s0066g01450

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_14s0066g01450	VIT_14s0066g01450.t01	VIT_14s0066g01450.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.30e-15	57.1	1295	1341

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           vC+vCg  ++d+ s++ C+ C+  +H  Cl+++     p+ + w+Cp+C 
   Q: 1295 VCKVCGIDKDDD-SVLLCDMCDAEYHTYCLNPP-LARIPEGN-WYCPSCV 1341
           8*****999977.7*******************.*******6.******6 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MGLGDSSGEY RDSKSETRSV LGIDLNEIPS SSFVEASHDV PDAYAVVRSF HGELSPAAGA 60
AAGLPGEGWG SVCAVCGAPE VGAQVLVCDG CERGFHLVCV GMPGRQAGML EEWVCGECVR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGACTCG GCGATTCGAG CGGCGAGTAC CGAGATTCGA AGTCCGAGAC CCGCTCCGTA 60
CTAGGTATCG ATCTCAATGA GATCCCTTCC TCGTCCTTCG TCGAGGCCTC GCACGACGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001487--Bromodomain
IPR003889--FYrich_C
IPR003888--FYrich_N
IPR001739--Methyl_CpG_DNA-bd
IPR028942--WHIM1_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51543--FYRC
PS51542--FYRN
PS50982--MBD
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00439--Bromodomain
PF01429--MBD
PF00628--PHD
PF15612--WHIM1

SMART

SM00249--PHD

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005720--C:nuclear heterochromatin
GO:0009506--C:plasmodesma
GO:0003677--F:DNA binding
GO:0004402--F:histone acetyltransferase activity
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043966--P:histone H3 acetylation
GO:0043967--P:histone H4 acetylation
GO:0010216--P:maintenance of DNA methylation
GO:0048573--P:photoperiodism, flowering
GO:0016567--P:protein ubiquitination
GO:0090308--P:regulation of methylation-dependent chromatin silencing
GO:0010223--P:secondary shoot formation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000077	Aegilops tauschii	45.96	0.00e+00	683.00
IUUC-Atr-002838	Amborella trichopoda	46.93	0.00e+00	1144.00
IUUC-Aly-006097	Arabidopsis lyrata	44.84	0.00e+00	1496.00
IUUC-Ath-007218	Arabidopsis thaliana	45.55	0.00e+00	1234.00
IUUC-Bdi-014742	Brachypodium distachyon	35.42	2.00e-126	446.00
IUUC-Bol-015336	Brassica oleracea	43.18	0.00e+00	1445.00
IUUC-Bra-017998	Brassica rapa	45.23	0.00e+00	1241.00
IUUC-Fox-037887	Fusarium oxysporum	43.40	1.00e-09	57.80
IUUC-Gma-042778	Glycine max	53.80	0.00e+00	1548.00
IUUC-Lpe-050785	Leersia perrieri	38.78	0.00e+00	1114.00
IUUC-Mtr-058285	Medicago truncatula	51.66	0.00e+00	1465.00
IUUC-Mvi-060436	Microbotryum violaceum	28.12	4.00e-10	58.90
IUUC-Mac-065069	Musa acuminata	48.43	0.00e+00	996.00
IUUC-Oba-075854	Oryza barthii	42.01	0.00e+00	1022.00
IUUC-Obr-076343	Oryza brachyantha	41.77	0.00e+00	1001.00
IUUC-Ogl-077886	Oryza glaberrima	39.93	7.00e-105	374.00
IUUC-Ogu-078887	Oryza glumaepatula	42.01	0.00e+00	1019.00
IUUC-Olo-080668	Oryza longistaminata	42.01	0.00e+00	1021.00
IUUC-Ome-081800	Oryza meridionalis	41.73	0.00e+00	1020.00
IUUC-Oni-082593	Oryza nivara	42.01	0.00e+00	1020.00
IUUC-Opu-083363	Oryza punctata	40.63	0.00e+00	1200.00
IUUC-Oru-084298	Oryza rufipogon	41.93	0.00e+00	1014.00
IUUC-Osa-085487	Oryza sativa	37.28	1.00e-86	313.00
IUUC-Ppa-095893	Physcomitrella patens	38.62	2.00e-108	387.00
IUUC-Ppe-101198	Prunus persica	59.15	0.00e+00	1412.00
IUUC-Sja-107970	Schizosaccharomyces japonicus	34.38	2.00e-13	71.20
IUUC-Sit-110633	Setaria italica	40.07	0.00e+00	1152.00
IUUC-Tca-121595	Theobroma cacao	56.02	0.00e+00	1787.00
IUUC-Tae-123821	Triticum aestivum	39.53	0.00e+00	1087.00
IUUC-Tur-126242	Triticum urartu	45.59	0.00e+00	680.00
IUUC-Uma-129445	Ustilago maydis	50.00	3.00e-12	67.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence