iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-003129

Ensembl Protein ID

ERN16988

UniProt Accession

U5D9B5; U5D9B5_AMBTC

Genbank Protein ID

ERN16988.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI392405

Gene Name

AMTR_s00057p00209380

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00057p00209380	ERN16988	ERN16988

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-24	85.5	376	413

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsd.tllvs.GsdDgtikvWDlrtgvllk 37
           gH ++vtc++  d   +v+ Gs D  +k+W+++tg  ++
   Q: 376  GHLGPVTCVHM-DsYKVVTgGSEDSFVKIWETDTGLETC 413
           8**********.44788995779999*******998776 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MDSANESSIK VDDLDMDTLV HCTSSLNLQD LANMAVTCRR FRDVAYSDHV WNRRFRERWP 60
VECTHSYNSK FGGIREAYLA RLTSLQQFKF ADPRIHLLDA GPTPSNHILL DKNNAFISQG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATTCAG CTAATGAAAG CTCCATCAAA GTGGACGACC TAGATATGGA TACTCTGGTT 60
CACTGCACCA GTAGCCTTAA CCTCCAAGAC CTAGCGAACA TGGCCGTGAC TTGTCGAAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR001810--F-box_dom
IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50181--FBOX
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12937--F-box-like
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00256--FBOX
SM00320--WD40

KEGG

atr:18445320

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014621	Brachypodium distachyon	45.29	2.00e-90	324.00
IUUC-Gma-043867	Glycine max	46.77	1.00e-113	402.00
IUUC-Hvu-047817	Hordeum vulgare	43.69	5.00e-94	337.00
IUUC-Lpe-051161	Leersia perrieri	45.11	1.00e-93	335.00
IUUC-Mtr-057899	Medicago truncatula	51.26	9.00e-86	308.00
IUUC-Mac-065373	Musa acuminata	48.15	3.00e-88	317.00
IUUC-Oba-075705	Oryza barthii	45.51	8.00e-99	352.00
IUUC-Obr-076913	Oryza brachyantha	45.19	3.00e-95	341.00
IUUC-Ogl-077871	Oryza glaberrima	45.72	4.00e-99	353.00
IUUC-Ogu-078128	Oryza glumaepatula	45.40	5.00e-99	353.00
IUUC-Oin-079947	Oryza indica	45.40	8.00e-99	352.00
IUUC-Olo-080246	Oryza longistaminata	44.17	2.00e-75	275.00
IUUC-Ome-081308	Oryza meridionalis	44.77	1.00e-97	348.00
IUUC-Oni-082542	Oryza nivara	45.40	8.00e-99	353.00
IUUC-Opu-083600	Oryza punctata	45.11	5.00e-98	350.00
IUUC-Oru-084880	Oryza rufipogon	45.19	1.00e-98	352.00
IUUC-Osa-085335	Oryza sativa	46.89	5.00e-79	286.00
IUUC-Ppa-095334	Physcomitrella patens	44.81	3.00e-109	387.00
IUUC-Pop-099428	Populus trichocarpa	53.13	1.00e-96	345.00
IUUC-Ppe-101795	Prunus persica	51.68	2.00e-98	351.00
IUUC-Smo-108689	Selaginella moellendorffii	40.87	5.00e-79	287.00
IUUC-Sit-110574	Setaria italica	46.67	4.00e-94	337.00
IUUC-Sly-111776	Solanum lycopersicum	41.85	4.00e-95	340.00
IUUC-Stu-112081	Solanum tuberosum	43.92	3.00e-56	210.00
IUUC-Sbi-114123	Sorghum bicolor	44.33	1.00e-98	352.00
IUUC-Tca-120973	Theobroma cacao	50.73	1.00e-123	435.00
IUUC-Tae-124174	Triticum aestivum	45.85	5.00e-96	343.00
IUUC-Vvi-131356	Vitis vinifera	52.63	1.00e-136	478.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence