iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057899

Ensembl Protein ID

KEH24984

UniProt Accession

A0A072U5F6; A0A072U5F6_MEDTR

Genbank Protein ID

KEH24984.1

Protein Name

WD domain, G-beta repeat protein

Genbank Nucleotide ID

CM001222

Gene Name

MTR_6g011500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_6g011500	KEH24984	KEH24984

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.10e-24	84.3	80	116

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcl..af.....sdtllvsGsdDgtikvWDlr 31
           gH+++v +l  ++     s + l+sG+ Dgt+++W+l+
   Q: 80   GHNGPVLSLsnKLlgeegS-KVLASGGEDGTVRLWSLS 116
           7999999986545777533.88*************985 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MVFLSASLHS LNVDQGSDAG MIIFDDHQDT VAVHKMSGHN ARITCMRLFS LGGQNVLVTS 60
SCDRTIQLWS KGSNLRSLKG HNGPVLSLSN KLLGEEGSKV LASGGEDGTV RLWSLSANGK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTCTTCT TATCTGCCTC TTTGCATTCA CTGAATGTTG ACCAGGGCTC AGATGCAGGA 60
ATGATAATTT TTGATGATCA TCAAGATACA GTTGCCGTCC ATAAGATGAG TGGTCATAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

mtr:MTR_6g011500

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003129	Amborella trichopoda	51.26	7.00e-83	300.00
IUUC-Bdi-014621	Brachypodium distachyon	48.17	1.00e-69	256.00
IUUC-Gma-043867	Glycine max	69.35	1.00e-139	489.00
IUUC-Hvu-047817	Hordeum vulgare	46.35	2.00e-72	266.00
IUUC-Lpe-051161	Leersia perrieri	48.19	1.00e-75	276.00
IUUC-Mac-065373	Musa acuminata	52.17	9.00e-89	320.00
IUUC-Oba-075705	Oryza barthii	44.29	3.00e-72	265.00
IUUC-Obr-076913	Oryza brachyantha	45.38	3.00e-72	265.00
IUUC-Ogl-077871	Oryza glaberrima	44.57	1.00e-72	266.00
IUUC-Ogu-078128	Oryza glumaepatula	45.17	2.00e-72	266.00
IUUC-Oin-079947	Oryza indica	45.17	2.00e-72	266.00
IUUC-Olo-080246	Oryza longistaminata	43.45	2.00e-68	252.00
IUUC-Ome-081308	Oryza meridionalis	44.60	7.00e-72	263.00
IUUC-Oni-082542	Oryza nivara	44.57	1.00e-72	266.00
IUUC-Opu-083600	Oryza punctata	46.31	3.00e-72	265.00
IUUC-Oru-084880	Oryza rufipogon	44.29	2.00e-72	265.00
IUUC-Osa-085335	Oryza sativa	44.57	1.00e-72	266.00
IUUC-Ppa-095334	Physcomitrella patens	44.48	2.00e-68	253.00
IUUC-Pop-099428	Populus trichocarpa	64.00	9.00e-121	426.00
IUUC-Ppe-101795	Prunus persica	65.13	3.00e-81	294.00
IUUC-Smo-108689	Selaginella moellendorffii	42.60	6.00e-54	204.00
IUUC-Sit-110574	Setaria italica	48.79	8.00e-77	280.00
IUUC-Sly-111776	Solanum lycopersicum	50.29	5.00e-84	304.00
IUUC-Stu-112081	Solanum tuberosum	52.48	2.00e-75	275.00
IUUC-Sbi-114123	Sorghum bicolor	48.40	2.00e-72	265.00
IUUC-Tca-120973	Theobroma cacao	61.21	6.00e-116	410.00
IUUC-Tae-123831	Triticum aestivum	46.33	9.00e-74	270.00
IUUC-Vvi-131356	Vitis vinifera	63.58	2.00e-122	432.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence