iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095334

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544955

Gene Name

PHYPADRAFT_164195

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S66_111V6	PP1S66_111V6.2	PP1S66_111V6.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.20e-19	67.7	225	261

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcl..af.....sdtllvsGsdDgtikvWDl 30
           gH+++v+ l  ++     s + l+sG+ Dgt+++W+l
   Q: 225  GHQGPVSTLadQLvgkqgSPPVLASGGTDGTVRLWSL 261
           7999999986555888752289*************97 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MVQSTCETGG SGQEAHHEYM DDRESTNSTT RSYETKVTDL DLDSLVLCAS NLSLHDLTNM 60
AMTCQRFRDA AYSDTVWEIQ CRKRWPSKQL YSGHTFQYCG GRDAYVARHT ATQQLRYTDP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTCACCGCC TTGCTATGCT TTTCACAGCT CAATTTGGAG CAGTGCAGTG ATCAAAGTGG 60
TTTTCCGCCG TGCCTCGCTA GTGCATTTGA GTGAAGAACG TTGCTAGTAA GGTTGCGAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001810--F-box_dom
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

ppp:PHYPADRAFT_164195

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003129	Amborella trichopoda	44.81	2.00e-108	385.00
IUUC-Bdi-014621	Brachypodium distachyon	38.11	1.00e-70	259.00
IUUC-Gma-043867	Glycine max	39.35	6.00e-90	323.00
IUUC-Hvu-047817	Hordeum vulgare	37.01	2.00e-74	272.00
IUUC-Lpe-051161	Leersia perrieri	38.68	8.00e-74	270.00
IUUC-Mtr-057899	Medicago truncatula	44.19	7.00e-70	256.00
IUUC-Mac-065373	Musa acuminata	41.97	7.00e-77	280.00
IUUC-Oba-075705	Oryza barthii	36.03	4.00e-73	268.00
IUUC-Obr-076913	Oryza brachyantha	38.34	3.00e-77	281.00
IUUC-Ogl-077871	Oryza glaberrima	36.03	3.00e-73	268.00
IUUC-Ogu-078128	Oryza glumaepatula	36.03	4.00e-73	268.00
IUUC-Oin-079947	Oryza indica	36.23	1.00e-73	270.00
IUUC-Olo-080246	Oryza longistaminata	34.62	3.00e-54	205.00
IUUC-Ome-081308	Oryza meridionalis	36.44	2.00e-73	269.00
IUUC-Oni-082542	Oryza nivara	36.23	1.00e-73	270.00
IUUC-Opu-083600	Oryza punctata	37.69	7.00e-73	267.00
IUUC-Oru-084880	Oryza rufipogon	36.03	2.00e-73	269.00
IUUC-Osa-085335	Oryza sativa	36.62	1.00e-55	209.00
IUUC-Pop-099428	Populus trichocarpa	48.60	9.00e-75	273.00
IUUC-Ppe-101795	Prunus persica	42.59	2.00e-75	275.00
IUUC-Smo-108689	Selaginella moellendorffii	46.57	3.00e-93	335.00
IUUC-Sit-110574	Setaria italica	36.59	1.00e-66	246.00
IUUC-Sly-111776	Solanum lycopersicum	36.96	3.00e-73	268.00
IUUC-Stu-112081	Solanum tuberosum	36.90	7.00e-40	156.00
IUUC-Sbi-114123	Sorghum bicolor	35.98	3.00e-69	255.00
IUUC-Tca-120973	Theobroma cacao	43.06	9.00e-100	356.00
IUUC-Tae-124174	Triticum aestivum	38.65	2.00e-75	275.00
IUUC-Vvi-131356	Vitis vinifera	43.00	2.00e-101	362.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence