iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_018720	EOY03630	EOY03630
TCM_018720	EOY03628	EOY03628
TCM_018720	EOY03629	EOY03629
TCM_018720	EOY03631	EOY03631

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.70e-08	34.4	671	717

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           vC +C +g+  ek l +C+ C++ fH++C++   e+e+pn++ w+C+ C 
   Q: 671  VCSICLDGKV-EKVLYRCQGCQRFFHADCMGVR-EQEVPNRS-WYCQFCV 717
           8*****9988.579*******************.*******8.******6 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MSNPSSTSGV SDQPGPGLMG LAHRGIGLSN TIHSEVAQCL PLPSLPVFCG ASDPELLLFD 60
DPTGGASRSL NRPEIIAQSS RIADLLRETD VSYLNLRDEA SSATYDYVEP LELHVQVLQY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACGATTAAG AAATTGAAAA TCGAACATAG AGCTTCTCCA CCAAGCTAGA TAGTAGGAAA 60
ATAGAGTCCA CCAAGGGCAT TTTAGTAACC TAAGTAATAT CCCCCATTCC ATTTTTAAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR026003--Cohesin_HEAT
IPR024986--Nipped-B_C
IPR033031--SCC2/Nipped-B
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50016--ZF_PHD_2

Pfam

PF12765--Cohesin_HEAT
PF12830--Nipped-B_C

SMART

SM00249--PHD

Gene Ontology

GO:0003682--F:chromatin binding
GO:0008270--F:zinc ion binding
GO:0034508--P:centromere complex assembly
GO:0009793--P:embryo development ending in seed dormancy
GO:0051177--P:meiotic sister chromatid cohesion
GO:0007064--P:mitotic sister chromatid cohesion
GO:0010468--P:regulation of gene expression

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence