iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007294

UUCD1 version

UUC-ArT-01126

Ensembl Protein ID

AT5G01980.1

UniProt Accession

Q9LZN3; Q9LZN3_ARATH

Genbank Protein ID

AAY25402.1; ABI93936.1; AED90416.1; CAB82971.1

Protein Name

At5g01980; Putative uncharacterized protein T7H20_30; RING/U-box superfamily protein

Genbank Nucleotide ID

BT021990; BT029027; CP002688; AL162508

Gene Name

At5g01980; T7H20.30; T7H20_30

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT5G01980	AT5G01980.1	AT5G01980.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.10e-07	32.3	350	391

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC+e f  ++++  lpC H++ha+C+  w       s + +CPlCr
   Q: 350  CAICKELFslRNETTQLPCLHLYHAHCIVPW------LSARNSCPLCR 391
           ******8888777999***************......**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MESQGPSNGH PMDISSNSIP SSACNLCGRV VQSASDDLEI FSLCVDCKFL LLEDFGTPAP 60
PLARRQTIRR RRMRRRRRTT RHDSSESVGV GDLSSQQFTH LISIARQSLS TVQASEDLRD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAGGAAA GAAGATGAGA AATGTCTCTC AGCTAGACAA GACCCCCATC CGTCGTCGTT 60
GACCCCTTTC CGCCATAAAA TCCCAACACC TGTTTTCTTG CATCGAAACC ATCCCCTTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

ath:AT5G01980

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000512	Aegilops tauschii	31.59	2.00e-50	192.00
IUUC-Atr-002553	Amborella trichopoda	43.45	2.00e-53	202.00
IUUC-Aly-006228	Arabidopsis lyrata	91.39	0.00e+00	752.00
IUUC-Ame-011175	Astyanax mexicanus	47.83	2.00e-21	94.00
IUUC-Bdi-014671	Brachypodium distachyon	34.20	3.00e-50	192.00
IUUC-Bol-015156	Brassica oleracea	64.87	2.00e-146	511.00
IUUC-Bra-017773	Brassica rapa	62.40	2.00e-131	461.00
IUUC-Dre-028637	Danio rerio	48.91	2.00e-23	100.00
IUUC-Ete-032501	Echinops telfairi	50.00	1.00e-20	91.30
IUUC-Eeu-035209	Erinaceus europaeus	47.62	4.00e-19	85.90
IUUC-Gma-044264	Glycine max	42.65	5.00e-96	344.00
IUUC-Hvu-047461	Hordeum vulgare	34.07	3.00e-55	208.00
IUUC-Lpe-051546	Leersia perrieri	34.63	2.00e-57	217.00
IUUC-Mtr-058205	Medicago truncatula	42.91	5.00e-88	317.00
IUUC-Mdo-062131	Monodelphis domestica	43.69	2.00e-20	90.90
IUUC-Oan-073246	Ornithorhynchus anatinus	45.63	2.00e-23	100.00
IUUC-Obr-076852	Oryza brachyantha	35.89	4.00e-53	202.00
IUUC-Ogu-078441	Oryza glumaepatula	33.73	3.00e-60	225.00
IUUC-Oin-079290	Oryza indica	43.94	1.00e-43	169.00
IUUC-Olo-080680	Oryza longistaminata	32.50	1.00e-53	203.00
IUUC-Oni-082704	Oryza nivara	33.40	4.00e-60	224.00
IUUC-Opu-083695	Oryza punctata	35.87	2.00e-53	204.00
IUUC-Oru-085044	Oryza rufipogon	34.10	6.00e-54	205.00
IUUC-Osa-086033	Oryza sativa	33.73	2.00e-60	226.00
IUUC-Pfo-097473	Poecilia formosa	37.24	2.00e-22	97.40
IUUC-Pop-099046	Populus trichocarpa	44.36	3.00e-69	255.00
IUUC-Ppe-101517	Prunus persica	50.48	2.00e-75	275.00
IUUC-Smo-109456	Selaginella moellendorffii	59.09	7.00e-41	160.00
IUUC-Sit-110141	Setaria italica	53.04	7.00e-36	144.00
IUUC-Stu-112213	Solanum tuberosum	34.92	3.00e-48	185.00
IUUC-Tni-120075	Tetraodon nigroviridis	47.83	2.00e-22	97.80
IUUC-Tca-121683	Theobroma cacao	40.40	8.00e-77	280.00
IUUC-Tae-124824	Triticum aestivum	32.56	2.00e-57	216.00
IUUC-Tur-126513	Triticum urartu	33.57	7.00e-51	194.00
IUUC-Ttr-129081	Tursiops truncatus	48.81	2.00e-19	87.80
IUUC-Xma-133809	Xiphophorus maculatus	37.24	2.00e-22	97.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence