iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d045176	Zm00001d045176_T001	Zm00001d045176_T001
Zm00001d045176	Zm00001d045176_T002	Zm00001d045176_T002

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-06	29.3	323	355

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH d  ++ a+ +d +++++G+ D+t+++WD+r
   Q: 323  GHLDYSFATAWhPDsRTFATGNQDKTCRIWDTR 355
           899*********999****************86 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MAASARDSAD AAERVVDDHD GWASDAEMDV EMDVVEGDAD RRDGGADGDD EYLLLTRIRD 60
TSAAEARAGK DIQGIPWERI HIARQDYRKA RLEQYKNYEN FPQSGELMDK LCKQVEKSSK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCCAGTCAC CCGTCGCTAT CGACCCCATC GCGTTGCCGG ATCGAGCTCA GCTCTATCTC 60
GAACCTTGGT TCGCCGCACG GCACCAGAAG CACGGCCGTG TTCTCATCCC CTCCACACGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

zma:100191443

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Hvu-047166	Hordeum vulgare	83.28	1.00e-150	525.00
IUUC-Kpa-049267	Komagataella pastoris	25.00	3.00e-30	125.00
IUUC-Sit-110330	Setaria italica	87.30	0.00e+00	754.00
IUUC-Sly-111890	Solanum lycopersicum	65.59	3.00e-169	587.00
IUUC-Stu-112172	Solanum tuberosum	65.35	2.00e-168	584.00
IUUC-Sbi-114627	Sorghum bicolor	94.55	0.00e+00	830.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence