iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002717

Ensembl Protein ID

ERN18907

UniProt Accession

U5DBU8; U5DBU8_AMBTC

Genbank Protein ID

ERN18907.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI392078

Gene Name

AMTR_s00067p00167320

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00067p00167320	ERN18907	ERN18907

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-26	92.1	602	633
UBD/Beta-Prp	2.00e-42	145.8	554	687

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           Ht+ +t+++f ++ t l+++s D ti++W+ +
   Q: 602  HTSLITDIRFkPNsTQLATSSFDRTIRLWNAT 633
           9**********777***************966 PP

UBD/Beta-Prp

   S: 45   lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdl.etgqcleetlsghdgvvncvv 144
           + +ls+++++v ++ fs+dgk+l++++  + + +w+++t k+ +t ++h++ +++++f p++  l++ s drtir+w+  +  +cl  +l+gh++ v+++ 
   Q: 554  VDCLSSNNSKVICCHFSSDGKLLASAGHEMKVVLWNMDTLKTESTPEEHTSLITDIRFKPNSTQLATSSFDRTIRLWNAtDPSYCLP-PLTGHKSHVMSLD 653
           456677777777777777777777777777777777777777777777777777777777777777777777777776513456666.7777777777777 PP
   S: 145  vhpdg.nllvsGslDrtvrlWdlktgkllrtltg 177
           +hp++ +ll s+  ++ +r W++++ ++ r  +g
   Q: 654  FHPKKtDLLCSCDGNSEIRYWNVAQLSCTRLSKG 687
           7777777777777777777777766666554433 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MQDAGFLLHF VLLNQRIFMD YFRSRPIMAQ SSWEADKMLD VYIYDYLLKR NLQASAKAFM 60
VEGKVASDPV AIDAPGGFLF EWWSVFWDIF IARTNEKHSE VAAAYIEAQQ MKAREQQQMQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAGGATG CTGGTTTCCT GCTTCACTTT GTTTTGCTGA ATCAGAGGTG AAAATGATAA 60
GAAGTTTGAT CTGTATCTGT GATTTTTAAT GTCCCTTTAT CTATTTGATC ATAGAATTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006594--LisH
IPR002469--Peptidase_S9B_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000776	Aegilops tauschii	68.17	5.00e-155	540.00
IUUC-Aly-006471	Arabidopsis lyrata	62.68	0.00e+00	890.00
IUUC-Ath-007671	Arabidopsis thaliana	60.86	0.00e+00	881.00
IUUC-Bdi-014855	Brachypodium distachyon	67.15	0.00e+00	1018.00
IUUC-Bol-015405	Brassica oleracea	60.15	0.00e+00	848.00
IUUC-Bra-017537	Brassica rapa	58.93	0.00e+00	871.00
IUUC-Gma-043351	Glycine max	67.16	0.00e+00	957.00
IUUC-Hvu-047358	Hordeum vulgare	67.87	2.00e-162	564.00
IUUC-Lpe-051527	Leersia perrieri	65.48	0.00e+00	983.00
IUUC-Mtr-057968	Medicago truncatula	58.13	0.00e+00	825.00
IUUC-Mac-064608	Musa acuminata	69.45	0.00e+00	1023.00
IUUC-Oba-075243	Oryza barthii	64.95	0.00e+00	976.00
IUUC-Obr-076847	Oryza brachyantha	65.85	0.00e+00	973.00
IUUC-Ogl-077774	Oryza glaberrima	66.05	0.00e+00	978.00
IUUC-Ogu-078076	Oryza glumaepatula	47.00	0.00e+00	630.00
IUUC-Oin-080026	Oryza indica	66.05	0.00e+00	977.00
IUUC-Olo-080947	Oryza longistaminata	62.87	0.00e+00	919.00
IUUC-Ome-081919	Oryza meridionalis	46.98	0.00e+00	630.00
IUUC-Oni-082308	Oryza nivara	46.64	0.00e+00	627.00
IUUC-Opu-083248	Oryza punctata	65.93	0.00e+00	983.00
IUUC-Oru-084534	Oryza rufipogon	66.30	0.00e+00	976.00
IUUC-Osa-085544	Oryza sativa	50.73	0.00e+00	694.00
IUUC-Ppa-095985	Physcomitrella patens	67.07	4.00e-161	559.00
IUUC-Pop-099999	Populus trichocarpa	63.51	0.00e+00	940.00
IUUC-Ppe-101584	Prunus persica	66.22	0.00e+00	986.00
IUUC-Smo-109593	Selaginella moellendorffii	53.83	0.00e+00	768.00
IUUC-Sit-110618	Setaria italica	67.23	0.00e+00	1013.00
IUUC-Sly-111127	Solanum lycopersicum	61.81	0.00e+00	919.00
IUUC-Stu-112830	Solanum tuberosum	61.63	0.00e+00	890.00
IUUC-Sbi-114046	Sorghum bicolor	66.87	0.00e+00	1024.00
IUUC-Tca-121754	Theobroma cacao	66.30	0.00e+00	959.00
IUUC-Tae-124159	Triticum aestivum	63.77	0.00e+00	784.00
IUUC-Tur-126636	Triticum urartu	62.93	0.00e+00	872.00
IUUC-Vvi-130936	Vitis vinifera	66.54	0.00e+00	1009.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence