iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-100009

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000346

Gene Name

POPTR_0010s08980g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0010s08980	POPTR_0010s08980.1	POPTR_0010s08980.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.50e-19	69.4	279	346

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
            flC I +++M+dPv l++G t +r++Ie w+++g++t+P t++ l++++l  n  lr+ i++w+e n
   Q: 279  PFLCCINGTVMTDPVSLCTGTTCERAAIEAWFDRGERTDPETGEILEDTTLRSNVRLRQSIEEWRELN 346
           69**************************************************************9865 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MRETYAERAL CLSEFSENQA GEARGTILAV LTSQVLKTAQ AAKDVLIEKE SFKVLAKHLF 60
DIESVLKELQ LQKLDDSRAA RQALETLEAD VKKANNLVEK YKNRARFYLL VKCRHIVNEV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGGGAGA CTTATGCAGA GAGAGCTCTT TGCCTCTCAG AGTTCTCAGA GAATCAAGCC 60
GGAGAAGCAA GAGGTACCTT TCTTTTTTGC TTTTAGTTTC TTTTGTTTTA TGTGGCTTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0010s08980g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002585	Amborella trichopoda	52.61	0.00e+00	954.00
IUUC-Gma-043747	Glycine max	68.72	0.00e+00	1340.00
IUUC-Mtr-058126	Medicago truncatula	67.21	0.00e+00	1280.00
IUUC-Mac-064921	Musa acuminata	55.00	0.00e+00	981.00
IUUC-Ppe-101705	Prunus persica	75.62	0.00e+00	1462.00
IUUC-Smo-109574	Selaginella moellendorffii	36.96	2.00e-153	535.00
IUUC-Sly-111263	Solanum lycopersicum	72.76	3.00e-131	461.00
IUUC-Stu-112918	Solanum tuberosum	63.53	0.00e+00	1279.00
IUUC-Tca-121788	Theobroma cacao	77.16	0.00e+00	1513.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence