iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006269

Ensembl Protein ID

fgenesh2_kg.8__455__AT5G43700.1

UniProt Accession

D7MNM8; D7MNM8_ARALL

Genbank Protein ID

EFH41666.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

GL348720

Gene Name

ATAUX2-11; ARALYDRAFT_494639

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.8__455__AT5G43700.1	fgenesh2_kg.8__455__AT5G43700.1	fgenesh2_kg.8__455__AT5G43700.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	1.30e-17	64.4	90	174

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt.lt..........elknsevalkYeDedGDlvtlksDedldkavsl 69
            vkvs++g+++++++dl  + ++ +L+k ++  ++          ++k+s++ ++YeD+dGD++ l++D++++++vs 
   Q: 90   YVKVSMDGAPYLRKIDLTMYKQYPELMKSLENmFKfsvgeyfereGYKGSDFVPTYEDKDGDWM-LVGDVPWEMFVS- 165
           69******************************6448899999999*******************.************. PP
   S: 70   laskksllrlliqk 83
                s++rl+i+k
   Q: 166  -----SCKRLRIMK 174
           .....********8 PP

Organism

Arabidopsis lyrata

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MEKVDVYDEL VNLKATELRL GLPGTEETVS CGKSNKRALL DDTEKEIEST GKNETASPPK 60
AQIVGWPPVR SYRKNNIQTK KNESEGQGNY VKVSMDGAPY LRKIDLTMYK QYPELMKSLE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCTCAAAGT TGCTGCTACT GTTTACTACC CGACAGCTTT AGCTTTTGCC TTTGTCCTTA 60
AATCAAGTTA ATCCCATTTT TTCTAAATTA CCAAAAAAGT GACTTTTCAA TTCCTATAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0043565--F:sequence-specific DNA binding
GO:0044212--F:transcription regulatory region DNA binding
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

aly:ARALYDRAFT_494639

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002618	Amborella trichopoda	56.28	2.00e-57	214.00
IUUC-Ath-007238	Arabidopsis thaliana	95.65	1.00e-101	360.00
IUUC-Bdi-014020	Brachypodium distachyon	51.00	1.00e-40	158.00
IUUC-Bol-015312	Brassica oleracea	84.90	2.00e-89	320.00
IUUC-Bra-018063	Brassica rapa	84.90	2.00e-89	320.00
IUUC-Gma-043277	Glycine max	64.14	1.00e-66	244.00
IUUC-Hvu-047853	Hordeum vulgare	48.34	3.00e-42	164.00
IUUC-Lpe-051475	Leersia perrieri	45.96	3.00e-36	144.00
IUUC-Obr-076144	Oryza brachyantha	50.98	1.00e-39	155.00
IUUC-Pma-094652	Petromyzon marinus	46.15	1.30e+00	26.60
IUUC-Pop-098896	Populus trichocarpa	61.66	9.00e-64	235.00
IUUC-Sbi-114105	Sorghum bicolor	49.52	9.00e-41	159.00
IUUC-Tca-121122	Theobroma cacao	68.75	1.00e-72	265.00
IUUC-Vvi-131257	Vitis vinifera	66.13	5.00e-63	232.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence