iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-100018

Ensembl Protein ID

POPTR_0010s08890.1

UniProt Accession

B9HUN8; B9HUN8_POPTR

Genbank Protein ID

EEF00827.2

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

CM000346

Gene Name

POPTRDRAFT_726443; POPTR_0010s08890g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0010s08890	POPTR_0010s08890.1	POPTR_0010s08890.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	2.60e-18	67.1	206	291

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 2    vrvkvsykgeirsfaldlekpgkfedLlkavrt.lt..........elknsevalkYeDedGDlvtlksDedldkavsllaskksllrlli 81
           + vkvs++g+++++++dl+++ ++ +Llka++  ++          ++k+se+a++YeD+dGD++ l +D+++d+++s      s+++l+i
   Q: 206  MYVKVSMDGAPYLRKIDLKVYKGYPELLKALENmFKltigeysereGYKGSEYAPTYEDKDGDWM-LIGDVPWDMFLS------SCKKLRI 289
           579******************************73366999999*9*******************.************......9*****9 PP
   S: 82   qk 83
            k
   Q: 290  IK 291
           87 PP

Organism

Populus trichocarpa

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MADHVHTISY MSCCLKGAAI ATDRLSLPLS IIHAFEERIT RHFSQPLPFV YKIHLFPFTP 60
ASPHRKTSYH FSQESLPKEI TRATSKSCIH HLLAVPVFEQ RLLENMEGGV AYENDLNLKA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTGACC ATGTCCACAC GATATCCTAC ATGTCATGTA GGCCACTACA CATCAAATTC 60
CAGCCCCCAC ATGGCCATAC CATGTCCACA CCGACCTACC ATGCGGACCC CATCGCCCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

pop:POPTR_0010s08890g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bgr-012301	Blumeria graminis	41.46	3.10e-01	29.30
IUUC-Cel-018552	Caenorhabditis elegans	62.50	1.70e-01	28.10
IUUC-Cin-025436	Ciona intestinalis	28.26	1.40e+00	27.70
IUUC-Gma-043277	Glycine max	70.37	1.00e-74	271.00
IUUC-Mtr-058760	Medicago truncatula	66.15	8.00e-67	245.00
IUUC-Ptr-090757	Pan troglodytes	45.83	6.00e-01	27.30
IUUC-Pab-098295	Pongo abelii	45.83	3.10e-01	28.10
IUUC-Ptt-103794	Puccinia triticina	45.45	1.20e-01	31.60

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence