iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005600

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

SNF2 domain-containing protein

Genbank Nucleotide ID

GL348720

Gene Name

ARALYDRAFT_917294

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_800694.1	scaffold_800694.1	scaffold_800694.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.30e-07	30.3	1068	1108

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C+iCle+ +d p+++pC H ++++Cl   w      s    +CP+Cr
   Q: 1068 CPICLESADD-PILTPCAHRMCRECLlTSW-----RSPSCGLCPICR 1108
           **********.999***********9999*.....5777779****8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MAIVDDSEKL ITESEAVSSS VDGKIVADTP DFIDESSLVV RTTTGVRISP HFVEQSLVDS 60
DGSKSDFSGV VAPAVTLPAK DEVISDGFAS VNKEIVESDS FRADSLETRV KEEPDLDVEN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CATTCTCGAT TTCTTCCCGA ATGGCCATCG TTGATGACTC TGAGAAGCTG ATAACCGAAT 60
CCGAAGCTGT TTCGAGTTCC GTTGATGGTA AGATCGTTGC AGATACTCCC GACTTTATTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR014905--HIRAN
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00271--Helicase_C
PF08797--HIRAN
PF00176--SNF2_N
PF00097--zf-C3HC4

SMART

SM00487--DEXDc
SM00490--HELICc
SM00910--HIRAN
SM00184--RING

Gene Ontology

GO:0009941--C:chloroplast envelope
GO:0005524--F:ATP binding
GO:0016818--F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0003676--F:nucleic acid binding
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_917294

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000167	Aegilops tauschii	60.72	0.00e+00	1107.00
IUUC-Atr-003058	Amborella trichopoda	64.16	0.00e+00	1192.00
IUUC-Ath-007079	Arabidopsis thaliana	91.29	0.00e+00	2303.00
IUUC-Acl-008022	Aspergillus clavatus	32.99	1.00e-133	470.00
IUUC-Afl-008514	Aspergillus flavus	32.55	2.00e-132	466.00
IUUC-Ani-009340	Aspergillus nidulans	33.06	6.00e-125	441.00
IUUC-Ang-009785	Aspergillus niger	34.87	7.00e-140	491.00
IUUC-Aor-010158	Aspergillus oryzae	32.55	2.00e-132	466.00
IUUC-Ate-010536	Aspergillus terreus	31.11	2.00e-115	410.00
IUUC-Bdi-014496	Brachypodium distachyon	58.60	0.00e+00	1085.00
IUUC-Bol-015995	Brassica oleracea	83.09	0.00e+00	1800.00
IUUC-Bra-017004	Brassica rapa	86.07	0.00e+00	1664.00
IUUC-Cne-026886	Cryptococcus neoformans	33.54	2.00e-146	513.00
IUUC-Dor-030651	Dipodomys ordii	31.67	2.00e-78	286.00
IUUC-Dse-031471	Dothistroma septosporum	33.79	4.00e-139	488.00
IUUC-Dme-031815	Drosophila melanogaster	31.38	5.00e-70	258.00
IUUC-Fox-038039	Fusarium oxysporum	37.77	4.00e-133	468.00
IUUC-Gma-042857	Glycine max	61.34	0.00e+00	1168.00
IUUC-Hvu-047747	Hordeum vulgare	61.01	0.00e+00	1113.00
IUUC-Lpe-051123	Leersia perrieri	58.13	0.00e+00	1168.00
IUUC-Lma-052956	Leptosphaeria maculans	33.33	4.00e-132	465.00
IUUC-Mtr-058194	Medicago truncatula	60.89	0.00e+00	1125.00
IUUC-Mac-064548	Musa acuminata	58.77	0.00e+00	1080.00
IUUC-Oba-075316	Oryza barthii	60.85	0.00e+00	1139.00
IUUC-Obr-076834	Oryza brachyantha	59.75	0.00e+00	1169.00
IUUC-Ogl-077508	Oryza glaberrima	62.69	0.00e+00	1156.00
IUUC-Ogu-078083	Oryza glumaepatula	60.96	0.00e+00	1158.00
IUUC-Oin-079893	Oryza indica	62.80	0.00e+00	1174.00
IUUC-Olo-080615	Oryza longistaminata	63.13	0.00e+00	1179.00
IUUC-Oni-082773	Oryza nivara	61.06	0.00e+00	1159.00
IUUC-Opu-083675	Oryza punctata	59.94	0.00e+00	1179.00
IUUC-Oru-084543	Oryza rufipogon	60.85	0.00e+00	1156.00
IUUC-Pop-099537	Populus trichocarpa	68.77	0.00e+00	1336.00
IUUC-Ppe-102107	Prunus persica	68.38	0.00e+00	1338.00
IUUC-Pte-104242	Pyrenophora teres	36.79	5.00e-128	451.00
IUUC-Pyt-104728	Pyrenophora triticirepentis	36.84	5.00e-128	451.00
IUUC-Sce-106396	Saccharomyces cerevisiae	33.83	8.00e-107	381.00
IUUC-Sja-107985	Schizosaccharomyces japonicus	35.33	4.00e-143	501.00
IUUC-Spo-108026	Schizosaccharomyces pombe	33.04	3.00e-136	479.00
IUUC-Ssl-108388	Sclerotinia sclerotiorum	33.82	2.00e-142	499.00
IUUC-Sit-110795	Setaria italica	62.18	0.00e+00	1070.00
IUUC-Sly-111031	Solanum lycopersicum	71.24	0.00e+00	1372.00
IUUC-Stu-112600	Solanum tuberosum	71.35	0.00e+00	1375.00
IUUC-Sbi-114616	Sorghum bicolor	59.80	0.00e+00	1084.00
IUUC-Tca-121146	Theobroma cacao	65.01	0.00e+00	1429.00
IUUC-Tae-124792	Triticum aestivum	60.83	0.00e+00	1109.00
IUUC-Tur-125999	Triticum urartu	57.47	0.00e+00	1054.00
IUUC-Vda-129849	Verticillium dahliae	35.44	2.00e-122	433.00
IUUC-Vvi-131508	Vitis vinifera	71.05	0.00e+00	1394.00
IUUC-Yli-134588	Yarrowia lipolytica	33.56	2.00e-100	359.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence