iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121753

Ensembl Protein ID

EOY06540

UniProt Accession

A0A061ENC2; A0A061ENC2_THECC

Genbank Protein ID

EOY06540.1

Protein Name

Nucleotide binding protein, putative isoform 1

Genbank Nucleotide ID

CM001882

Gene Name

TCM_021226

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_021226	EOY06540	EOY06540
TCM_021226	EOY06541	EOY06541

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-11	45.4	843	879

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgvll 36
           H+  vtc+++  ++  l+sGs D+ti vW + +++l+
   Q: 843  HKKAVTCFSLfePGESLLSGSADKTIGVWQMVQNKLE 879
           8999****95599899*************99888776 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MKNETQASTK AKENHVLCKA IKDWDHIPRL QLQSMQLYRD TSSKRLQDAL KESQSDTPSV 60
NSGFIDFEDE YDLENHLILT NLFLNQENME DYKTLLDTTR TDADDQEQAS SDQKLHPLYG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTGATGCTG ATGCAGAAAA AGTTATAATC AAATTCAAGG ACTCTCTATT AGTACAGCTA 60
ACATCCTGCA TTATCATACT TCAATAATCC AATCAATGTC AATAATCAAT GTATAATTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR016346--Guanine_nucleotide-bd_bsu
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0007165--P:signal transduction

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000535	Aegilops tauschii	45.41	0.00e+00	851.00
IUUC-Atr-002498	Amborella trichopoda	48.50	0.00e+00	747.00
IUUC-Aly-006263	Arabidopsis lyrata	52.96	1.00e-155	543.00
IUUC-Ath-006648	Arabidopsis thaliana	53.91	0.00e+00	981.00
IUUC-Bdi-014493	Brachypodium distachyon	45.27	0.00e+00	783.00
IUUC-Bol-016092	Brassica oleracea	59.44	0.00e+00	960.00
IUUC-Bra-016701	Brassica rapa	59.43	0.00e+00	968.00
IUUC-Gma-043180	Glycine max	55.52	0.00e+00	1130.00
IUUC-Hvu-047807	Hordeum vulgare	53.11	1.00e-138	485.00
IUUC-Lpe-051180	Leersia perrieri	53.05	0.00e+00	857.00
IUUC-Mtr-057703	Medicago truncatula	61.45	0.00e+00	1018.00
IUUC-Mac-064996	Musa acuminata	48.74	0.00e+00	933.00
IUUC-Oba-075721	Oryza barthii	53.05	0.00e+00	862.00
IUUC-Obr-076233	Oryza brachyantha	53.29	0.00e+00	861.00
IUUC-Ogl-077542	Oryza glaberrima	53.05	0.00e+00	862.00
IUUC-Ogu-078363	Oryza glumaepatula	47.62	0.00e+00	858.00
IUUC-Oin-079050	Oryza indica	53.05	0.00e+00	860.00
IUUC-Olo-080332	Oryza longistaminata	52.91	2.00e-167	582.00
IUUC-Ome-081772	Oryza meridionalis	53.18	0.00e+00	855.00
IUUC-Oni-082467	Oryza nivara	53.05	0.00e+00	860.00
IUUC-Opu-083132	Oryza punctata	53.52	0.00e+00	866.00
IUUC-Oru-084836	Oryza rufipogon	47.62	0.00e+00	861.00
IUUC-Osa-085493	Oryza sativa	53.05	0.00e+00	862.00
IUUC-Pop-099360	Populus trichocarpa	60.00	0.00e+00	1172.00
IUUC-Ppe-102099	Prunus persica	63.53	0.00e+00	1133.00
IUUC-Sit-110371	Setaria italica	48.08	0.00e+00	865.00
IUUC-Sly-111793	Solanum lycopersicum	55.99	0.00e+00	1038.00
IUUC-Stu-112760	Solanum tuberosum	52.38	0.00e+00	1023.00
IUUC-Sbi-114833	Sorghum bicolor	51.30	0.00e+00	847.00
IUUC-Tae-124317	Triticum aestivum	45.58	0.00e+00	855.00
IUUC-Tur-126343	Triticum urartu	48.09	0.00e+00	850.00
IUUC-Vvi-130975	Vitis vinifera	62.76	0.00e+00	1206.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence