iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Kpa-049343

Ensembl Protein ID

CAY71309

UniProt Accession

C4R6T4; C4R6T4_KOMPG

Genbank Protein ID

CAY71309.1

Protein Name

Splicing factor that is found in the Cef1p subcomplex of the spliceosome

Genbank Nucleotide ID

FN392322

Gene Name

PAS_chr4_0083

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PAS_chr4_0083	CAY71309	CAY71309

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-44	145.9	139	175
UBD/Beta-Prp	1.00e-71	239.6	133	275

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gHt++v+++a  ++ + +++Gs D tikvWDl +g+l
   Q: 139  GHTGWVRSVAVePEnKWFATGSADRTIKVWDLVSGKL 175
           8***********88899****************9987 PP

UBD/Beta-Prp

   S: 129  leetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvr 229
           l  +  gh+g+v++v+v p+++ +++Gs+Drt+++Wdl +gkl  tltg h  +v+ l +++  ++l sgs+d+tvk wdl++++++r ++gh + v+sv+
   Q: 133  LMRVIVGHTGWVRSVAVEPENKWFATGSADRTIKVWDLVSGKLKLTLTG-HIMAVRGLVISDRHPYLFSGSEDKTVKCWDLEKNQIIRDYHGHLSSVYSVD 232
           4447779*****************************************9.*************************************************** PP
   S: 230  fspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvav 272
           ++p  +++++++ D ++r+Wd+rs+++++tl++h s+++ v++
   Q: 233  LHPTIDIIATAGRDSVVRVWDIRSRTPIHTLTGHTSTITNVKC 275
           *****************************************99 PP

Organism

Komagataella pastoris

Protein Sequence
(Fasta)

MFSESVTSGV DLLEKRTKKL FGVDTDPSQI FVDDDASSLY SQTIIEKQYR NTQSLPEYLE 60
AEIDREKYGE SSIITSLKEK ALPDINRSSQ QAQLVLRKNT QDIQAQQLIK AQAQTAGLYS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTTAGTG AAAGCGTCAC ATCAGGGGTT GACCTGTTGG AAAAAAGGAC CAAGAAGCTC 60
TTTGGAGTAG ATACTGATCC AAGTCAGATC TTTGTTGATG ATGACGCTTC TTCGCTCTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071014--C:post-mRNA release spliceosomal complex
GO:0000974--C:Prp19 complex
GO:0045292--P:mRNA cis splicing, via spliceosome

KEGG

ppa:PAS_chr4_0083

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000084	Aegilops tauschii	53.39	3.00e-114	403.00
IUUC-Aml-001605	Ailuropoda melanoleuca	58.77	5.00e-120	422.00
IUUC-Atr-002757	Amborella trichopoda	57.19	2.00e-112	397.00
IUUC-Apl-003198	Anas platyrhynchos	59.08	3.00e-120	423.00
IUUC-Aca-004683	Anolis carolinensis	58.46	5.00e-120	422.00
IUUC-Aly-005775	Arabidopsis lyrata	51.47	2.00e-117	413.00
IUUC-Ath-007460	Arabidopsis thaliana	50.80	6.00e-116	408.00
IUUC-Ago-007884	Ashbya gossypii	51.52	7.00e-128	448.00
IUUC-Acl-008153	Aspergillus clavatus	56.56	2.00e-117	414.00
IUUC-Afl-008384	Aspergillus flavus	48.86	5.00e-121	425.00
IUUC-Afu-009045	Aspergillus fumigatus	48.18	8.00e-118	414.00
IUUC-Ani-009229	Aspergillus nidulans	59.08	1.00e-118	417.00
IUUC-Ang-009812	Aspergillus niger	59.87	8.00e-112	394.00
IUUC-Aor-010059	Aspergillus oryzae	48.86	5.00e-121	425.00
IUUC-Ate-010351	Aspergillus terreus	60.06	2.00e-126	443.00
IUUC-Ame-011613	Astyanax mexicanus	40.66	7.00e-65	238.00
IUUC-Bgr-012042	Blumeria graminis	61.16	8.00e-129	451.00
IUUC-Bta-012406	Bos taurus	58.77	8.00e-120	421.00
IUUC-Bci-013760	Botrytis cinerea	53.03	6.00e-125	438.00
IUUC-Bdi-014776	Brachypodium distachyon	57.28	1.00e-116	411.00
IUUC-Bol-016189	Brassica oleracea	56.07	1.00e-115	407.00
IUUC-Bra-018044	Brassica rapa	56.07	2.00e-115	406.00
IUUC-Cel-018651	Caenorhabditis elegans	56.92	1.00e-117	414.00
IUUC-Cja-019974	Callithrix jacchus	56.20	1.00e-119	421.00
IUUC-Cfa-021085	Canis familiaris	58.77	6.00e-120	422.00
IUUC-Cpo-021458	Cavia porcellus	58.46	1.00e-119	421.00
IUUC-Cre-022880	Chlamydomonas reinhardtii	55.26	8.00e-115	404.00
IUUC-Csa-023883	Chlorocebus sabaeus	58.46	1.00e-119	421.00
IUUC-Cho-024623	Choloepus hoffmanni	57.85	1.00e-116	410.00
IUUC-Cin-025190	Ciona intestinalis	54.55	4.00e-118	416.00
IUUC-Csv-026367	Ciona savignyi	54.27	4.00e-118	416.00
IUUC-Cgl-026499	Colletotrichum gloeosporioides	61.19	2.00e-130	457.00
IUUC-Cne-027069	Cryptococcus neoformans	49.55	2.00e-121	426.00
IUUC-Cme-027233	Cyanidioschyzon merolae	29.97	1.00e-33	135.00
IUUC-Dre-028260	Danio rerio	59.08	1.00e-120	424.00
IUUC-Dno-029112	Dasypus novemcinctus	58.46	1.00e-119	421.00
IUUC-Dor-031118	Dipodomys ordii	58.77	4.00e-120	422.00
IUUC-Dse-031493	Dothistroma septosporum	60.00	9.00e-118	414.00
IUUC-Dme-032138	Drosophila melanogaster	57.50	4.00e-116	409.00
IUUC-Ete-032411	Echinops telfairi	52.00	7.00e-99	352.00
IUUC-Eca-033521	Equus caballus	58.15	2.00e-119	420.00
IUUC-Eeu-035249	Erinaceus europaeus	46.72	1.00e-92	331.00
IUUC-Fca-036358	Felis catus	58.77	3.00e-120	422.00
IUUC-Fal-036933	Ficedula albicollis	59.08	3.00e-120	423.00
IUUC-Fox-037713	Fusarium oxysporum	51.54	1.00e-128	450.00
IUUC-Fso-038380	Fusarium solani	60.49	4.00e-126	442.00
IUUC-Gmo-039133	Gadus morhua	59.69	2.00e-120	423.00
IUUC-Ggr-039915	Gaeumannomyces graminis	59.08	2.00e-116	410.00
IUUC-Gga-041176	Gallus gallus	58.46	1.00e-119	421.00
IUUC-Gac-042344	Gasterosteus aculeatus	59.69	6.00e-122	428.00
IUUC-Gma-043328	Glycine max	55.62	2.00e-118	416.00
IUUC-Ggo-044478	Gorilla gorilla	58.46	1.00e-119	421.00
IUUC-Hsa-046037	Homo sapiens	58.46	1.00e-119	421.00
IUUC-Hvu-047349	Hordeum vulgare	57.89	4.00e-118	416.00
IUUC-Itr-048390	Ictidomys tridecemlineatus	58.46	1.00e-119	421.00
IUUC-Lch-049830	Latimeria chalumnae	59.08	2.00e-120	423.00
IUUC-Lpe-051442	Leersia perrieri	57.94	1.00e-117	414.00
IUUC-Loc-051794	Lepisosteus oculatus	60.70	1.00e-118	417.00
IUUC-Lma-053137	Leptosphaeria maculans	54.71	6.00e-124	435.00
IUUC-Laf-053471	Loxodonta africana	54.29	1.00e-119	421.00
IUUC-Mcc-055627	Macaca mulatta	58.46	1.00e-119	421.00
IUUC-Meu-056148	Macropus eugenii	58.62	8.00e-118	414.00
IUUC-Mor-056960	Magnaporthe oryzae	59.42	2.00e-127	447.00
IUUC-Mtr-057816	Medicago truncatula	58.36	4.00e-117	412.00
IUUC-Mla-059031	Melampsora laricipopulina	48.40	2.00e-112	397.00
IUUC-Mga-059337	Meleagris gallopavo	58.46	1.00e-119	421.00
IUUC-Mvi-060217	Microbotryum violaceum	53.60	2.00e-115	407.00
IUUC-Mmr-061018	Microcebus murinus	58.46	1.00e-119	421.00
IUUC-Mdo-062863	Monodelphis domestica	58.57	7.00e-118	415.00
IUUC-Mmu-063988	Mus musculus	58.46	7.00e-119	418.00
IUUC-Mac-064459	Musa acuminata	57.52	3.00e-112	396.00
IUUC-Mpu-066559	Mustela putorius furo	58.77	6.00e-120	422.00
IUUC-Mlu-067361	Myotis lucifugus	58.46	1.00e-119	421.00
IUUC-Nfi-068492	Neosartorya fischeri	47.95	7.00e-118	415.00
IUUC-Ncr-068808	Neurospora crassa	59.88	1.00e-124	437.00
IUUC-Nle-069875	Nomascus leucogenys	58.46	1.00e-119	421.00
IUUC-Opr-070462	Ochotona princeps	56.72	3.00e-95	340.00
IUUC-Ont-071365	Oreochromis niloticus	59.38	7.00e-121	425.00
IUUC-Oan-072708	Ornithorhynchus anatinus	58.77	7.00e-120	422.00
IUUC-Ocu-074594	Oryctolagus cuniculus	58.46	1.00e-119	421.00
IUUC-Oba-075570	Oryza barthii	57.63	4.00e-116	409.00
IUUC-Obr-076366	Oryza brachyantha	60.62	8.00e-87	310.00
IUUC-Ogl-077153	Oryza glaberrima	58.23	9.00e-116	408.00
IUUC-Ogu-078540	Oryza glumaepatula	57.63	4.00e-116	409.00
IUUC-Oin-079612	Oryza indica	56.75	2.00e-114	403.00
IUUC-Olo-081077	Oryza longistaminata	56.75	2.00e-114	403.00
IUUC-Ome-081236	Oryza meridionalis	56.44	4.00e-114	402.00
IUUC-Oni-082499	Oryza nivara	57.63	4.00e-116	409.00
IUUC-Opu-083499	Oryza punctata	56.75	3.00e-114	403.00
IUUC-Oru-084276	Oryza rufipogon	57.63	4.00e-116	409.00
IUUC-Osa-085849	Oryza sativa	57.63	4.00e-116	409.00
IUUC-Ola-086655	Oryzias latipes	59.38	4.00e-121	426.00
IUUC-Olu-087637	Ostreococcus lucimarinus	55.56	2.00e-113	399.00
IUUC-Oga-087934	Otolemur garnettii	58.46	1.00e-119	421.00
IUUC-Oar-090185	Ovis aries	58.77	9.00e-120	421.00
IUUC-Ptr-091198	Pan troglodytes	58.46	1.00e-119	421.00
IUUC-Pan-092622	Papio anubis	58.46	1.00e-119	421.00
IUUC-Psi-093320	Pelodiscus sinensis	58.77	9.00e-120	421.00
IUUC-Pma-094638	Petromyzon marinus	57.69	7.00e-120	421.00
IUUC-Pno-094826	Phaeosphaeria nodorum	46.65	9.00e-101	358.00
IUUC-Ppa-095576	Physcomitrella patens	55.23	4.00e-107	379.00
IUUC-Pfo-096894	Poecilia formosa	59.08	2.00e-120	423.00
IUUC-Pab-098020	Pongo abelii	58.46	1.00e-119	421.00
IUUC-Pop-099180	Populus trichocarpa	57.52	2.00e-110	390.00
IUUC-Pca-100909	Procavia capensis	60.23	3.00e-98	350.00
IUUC-Ppe-101346	Prunus persica	55.45	3.00e-115	406.00
IUUC-Pva-102167	Pteropus vampyrus	50.46	7.00e-98	348.00
IUUC-Pgr-103516	Puccinia graminis	58.58	7.00e-114	401.00
IUUC-Ptt-103738	Puccinia triticina	48.64	3.00e-113	399.00
IUUC-Pte-104352	Pyrenophora teres	54.71	2.00e-126	443.00
IUUC-Pyt-104632	Pyrenophora triticirepentis	54.97	3.00e-127	446.00
IUUC-Rno-105291	Rattus norvegicus	54.85	1.00e-119	421.00
IUUC-Sce-106204	Saccharomyces cerevisiae	49.88	1.00e-126	444.00
IUUC-Sha-106943	Sarcophilus harrisii	57.14	2.00e-114	404.00
IUUC-Sja-107659	Schizosaccharomyces japonicus	60.12	2.00e-121	427.00
IUUC-Spo-108049	Schizosaccharomyces pombe	58.95	8.00e-120	421.00
IUUC-Smo-109043	Selaginella moellendorffii	53.25	3.00e-110	389.00
IUUC-Sit-110431	Setaria italica	56.70	7.00e-116	408.00
IUUC-Sly-111391	Solanum lycopersicum	57.28	3.00e-111	392.00
IUUC-Stu-112364	Solanum tuberosum	52.79	8.00e-96	340.00
IUUC-Sar-113450	Sorex araneus	58.77	2.00e-119	420.00
IUUC-Sbi-113829	Sorghum bicolor	57.94	2.00e-116	410.00
IUUC-Sre-115153	Sporisorium reilianum	57.74	2.00e-117	413.00
IUUC-Ssc-116274	Sus scrofa	58.46	1.00e-119	421.00
IUUC-Tgu-117417	Taeniopygia guttata	59.08	3.00e-120	423.00
IUUC-Tru-117615	Takifugu rubripes	59.38	5.00e-115	405.00
IUUC-Tsy-119480	Tarsius syrichta	58.46	1.00e-119	421.00
IUUC-Tni-119847	Tetraodon nigroviridis	59.69	4.00e-121	426.00
IUUC-Tca-121287	Theobroma cacao	56.47	4.00e-114	402.00
IUUC-Tre-122010	Trichoderma reesei	61.42	7.00e-128	448.00
IUUC-Tvi-122475	Trichoderma virens	60.80	2.00e-127	446.00
IUUC-Tae-124397	Triticum aestivum	57.89	5.00e-118	415.00
IUUC-Tur-126116	Triticum urartu	49.85	3.00e-90	323.00
IUUC-Tme-126992	Tuber melanosporum	60.19	8.00e-122	428.00
IUUC-Tbe-127803	Tupaia belangeri	60.48	3.00e-95	339.00
IUUC-Ttr-128933	Tursiops truncatus	58.46	1.00e-119	421.00
IUUC-Uma-129447	Ustilago maydis	59.87	6.00e-115	405.00
IUUC-Vda-129780	Verticillium dahliae	62.35	3.00e-129	453.00
IUUC-Vpa-130557	Vicugna pacos	37.76	4.00e-36	143.00
IUUC-Vvi-130918	Vitis vinifera	56.86	1.00e-111	394.00
IUUC-Xtr-132409	Xenopus tropicalis	58.77	7.00e-120	421.00
IUUC-Xma-133420	Xiphophorus maculatus	59.69	2.00e-121	426.00
IUUC-Yli-134362	Yarrowia lipolytica	52.58	2.00e-132	463.00
IUUC-Zma-135804	Zea mays	56.13	1.00e-113	401.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence