iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cfa-020520

Ensembl Protein ID

ENSCAFP00000007857.4

UniProt Accession

F1P7R7; F1P7R7_CANLF

Genbank Protein ID

ENSCAFP00000007857

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAEX03010810

Gene Name

WDR43

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCAFG00000005253.4	ENSCAFT00000008476.4	ENSCAFP00000007857.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-16	59.3	124	159

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH ++v+c+++ +d + l s+sdD+ i  W++ t++
   Q: 124  GHDNKVNCIQWhQDnGCLYSCSDDKYIVEWNTQTCK 159
           8***********77799********99866665554 PP

Organism

Canis familiaris

Protein Sequence
(Fasta)

MAAGGGRVAD PLSPAGVPCA FSPLNQAYFA LASADGQLRV WETANNRLHQ EYVPSAHLSG 60
TCTCLAWAPA RLQAKESPQR KKRKSEAIGT SNQIDLLALG TAVGSILLYS TVKGELHSKL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAATGGTCT ATTTGATGTA GTAACATGGG ATTGATCCTG ACCAAATAAG GGAGGGGGTG 60
GATGGCAGAT CCTACCGTTA CTTTTACACA ATTATGACTG AATAGACTGT TATGTGTATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0001650--C:fibrillar center
GO:0003723--F:RNA binding

KEGG

cfa:475713

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001865	Ailuropoda melanoleuca	97.80	0.00e+00	1161.00
IUUC-Atr-002533	Amborella trichopoda	20.10	9.00e-23	102.00
IUUC-Apl-003242	Anas platyrhynchos	74.38	0.00e+00	810.00
IUUC-Aca-004607	Anolis carolinensis	70.92	0.00e+00	863.00
IUUC-Aly-006074	Arabidopsis lyrata	25.09	4.00e-16	80.10
IUUC-Ath-007222	Arabidopsis thaliana	25.09	8.00e-16	79.00
IUUC-Ame-011014	Astyanax mexicanus	54.10	6.00e-171	594.00
IUUC-Bta-012605	Bos taurus	94.71	0.00e+00	1175.00
IUUC-Bdi-014072	Brachypodium distachyon	20.71	3.00e-20	93.60
IUUC-Bol-016255	Brassica oleracea	28.31	1.00e-22	101.00
IUUC-Bra-016850	Brassica rapa	27.61	3.00e-24	106.00
IUUC-Cja-019620	Callithrix jacchus	92.65	0.00e+00	1124.00
IUUC-Cpo-022456	Cavia porcellus	88.69	0.00e+00	1060.00
IUUC-Cho-024726	Choloepus hoffmanni	91.86	0.00e+00	1075.00
IUUC-Cin-025761	Ciona intestinalis	36.21	3.00e-98	352.00
IUUC-Dre-028051	Danio rerio	54.55	5.00e-174	604.00
IUUC-Dno-030031	Dasypus novemcinctus	92.49	0.00e+00	1122.00
IUUC-Dme-031653	Drosophila melanogaster	26.53	7.00e-44	172.00
IUUC-Ete-032863	Echinops telfairi	81.73	1.00e-94	340.00
IUUC-Eca-033243	Equus caballus	95.72	0.00e+00	983.00
IUUC-Eeu-034970	Erinaceus europaeus	89.70	0.00e+00	816.00
IUUC-Fca-036009	Felis catus	96.78	0.00e+00	1152.00
IUUC-Fal-037264	Ficedula albicollis	71.86	0.00e+00	783.00
IUUC-Gmo-039124	Gadus morhua	55.84	2.00e-177	615.00
IUUC-Gga-040862	Gallus gallus	72.87	0.00e+00	862.00
IUUC-Gac-041468	Gasterosteus aculeatus	54.15	0.00e+00	637.00
IUUC-Gma-042795	Glycine max	22.75	7.00e-13	68.90
IUUC-Ggo-044432	Gorilla gorilla	93.33	0.00e+00	1124.00
IUUC-Hsa-047036	Homo sapiens	93.00	0.00e+00	1122.00
IUUC-Itr-048644	Ictidomys tridecemlineatus	92.15	0.00e+00	1110.00
IUUC-Lch-049553	Latimeria chalumnae	65.96	0.00e+00	755.00
IUUC-Laf-053462	Loxodonta africana	90.48	0.00e+00	1137.00
IUUC-Mcc-055239	Macaca mulatta	92.65	0.00e+00	1122.00
IUUC-Mtr-057977	Medicago truncatula	21.11	5.00e-17	82.80
IUUC-Mga-060079	Meleagris gallopavo	74.19	0.00e+00	793.00
IUUC-Mmr-061472	Microcebus murinus	91.19	0.00e+00	1129.00
IUUC-Mdo-061972	Monodelphis domestica	79.12	0.00e+00	1028.00
IUUC-Mmu-063354	Mus musculus	87.31	0.00e+00	1050.00
IUUC-Mac-065064	Musa acuminata	23.64	2.00e-17	83.60
IUUC-Mpu-066877	Mustela putorius furo	96.66	0.00e+00	1168.00
IUUC-Mlu-067476	Myotis lucifugus	91.65	0.00e+00	1095.00
IUUC-Nle-069119	Nomascus leucogenys	93.00	0.00e+00	1120.00
IUUC-Ont-072093	Oreochromis niloticus	54.47	0.00e+00	673.00
IUUC-Oan-072944	Ornithorhynchus anatinus	72.67	0.00e+00	868.00
IUUC-Ocu-074472	Oryctolagus cuniculus	91.82	0.00e+00	1068.00
IUUC-Oba-075009	Oryza barthii	19.01	6.00e-15	75.90
IUUC-Ogl-077189	Oryza glaberrima	19.67	2.00e-14	74.30
IUUC-Oin-079064	Oryza indica	19.31	6.00e-15	75.90
IUUC-Opu-083604	Oryza punctata	20.60	4.00e-14	73.20
IUUC-Oru-084620	Oryza rufipogon	19.31	7.00e-15	75.50
IUUC-Osa-085345	Oryza sativa	19.31	4.00e-15	76.60
IUUC-Ola-086626	Oryzias latipes	53.91	0.00e+00	662.00
IUUC-Oga-087911	Otolemur garnettii	91.69	0.00e+00	1095.00
IUUC-Ptr-091603	Pan troglodytes	92.67	0.00e+00	1119.00
IUUC-Pan-092569	Papio anubis	92.65	0.00e+00	1122.00
IUUC-Pma-094287	Petromyzon marinus	52.41	0.00e+00	635.00
IUUC-Ppa-095327	Physcomitrella patens	25.68	1.00e-37	151.00
IUUC-Pfo-097292	Poecilia formosa	54.35	0.00e+00	636.00
IUUC-Pab-097878	Pongo abelii	93.57	0.00e+00	1111.00
IUUC-Pop-099418	Populus trichocarpa	24.36	2.00e-15	77.80
IUUC-Pca-100941	Procavia capensis	84.91	0.00e+00	1001.00
IUUC-Ppe-101779	Prunus persica	20.33	4.00e-20	92.80
IUUC-Pva-102493	Pteropus vampyrus	86.95	0.00e+00	1037.00
IUUC-Rno-105084	Rattus norvegicus	87.98	0.00e+00	1047.00
IUUC-Sha-107486	Sarcophilus harrisii	80.90	0.00e+00	995.00
IUUC-Smo-108825	Selaginella moellendorffii	22.87	9.00e-22	98.60
IUUC-Sit-110825	Setaria italica	21.12	7.00e-19	89.00
IUUC-Sly-111365	Solanum lycopersicum	23.53	1.00e-21	98.20
IUUC-Stu-112812	Solanum tuberosum	23.65	2.00e-20	94.00
IUUC-Sar-113326	Sorex araneus	94.63	2.00e-141	496.00
IUUC-Sbi-114426	Sorghum bicolor	20.50	3.00e-21	97.10
IUUC-Tgu-116726	Taeniopygia guttata	69.46	0.00e+00	846.00
IUUC-Tru-117848	Takifugu rubripes	54.15	0.00e+00	639.00
IUUC-Tsy-119091	Tarsius syrichta	64.44	1.00e-132	466.00
IUUC-Tni-120591	Tetraodon nigroviridis	54.65	0.00e+00	641.00
IUUC-Tca-121576	Theobroma cacao	21.01	4.00e-22	99.80
IUUC-Tae-125648	Triticum aestivum	20.81	1.00e-16	81.60
IUUC-Tbe-127832	Tupaia belangeri	93.32	0.00e+00	973.00
IUUC-Ttr-128812	Tursiops truncatus	95.04	0.00e+00	999.00
IUUC-Xma-133557	Xiphophorus maculatus	54.50	0.00e+00	637.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence