iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017887

Ensembl Protein ID

Bra017164.1-P

UniProt Accession

M4DKY3; M4DKY3_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra017164	Bra017164.1	Bra017164.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.70e-29	100.2	349	381
UBD/Beta-Prp	2.10e-42	146.3	442	677

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           H++s++ ++f +d ++l+sG++D +i+vW++ +
   Q: 349  HEGSIWTIKFsPDaHYLASGGHDQVIHVWEVQE 381
           9*****************************865 PP

UBD/Beta-Prp

   S: 40   ttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdletgqcleetls 134
           ++ k + sl+gh a + ++++s+++ +l+++s D+t+++wdl+t++c+  +  h+d+v++++f+p + ++++sGs d  ir+w ++++q++    s
   Q: 442  SE-KPVCSLKGHLADILDLSWSKSQ-LLLSSSMDKTVRLWDLETRTCLKLFA-HNDYVTCIQFNPvDENYFISGSLDAKIRIWSIQNRQVVD--WS 532
           44.45679****************8.***********************999.************888***********************9..55 PP
   S: 135  ghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl........tgghtdsvyslsfdsng.kelvsgsldgtvklwdlqtgecvrtlngh 221
             +++v+ +++ pdg+  + Gs+ +++r +d +  kl +t         +++ +++++s +f++    e++  s d+++++ d   +e++++++g 
   Q: 533  DLHEMVTAACYTPDGQGAFIGSNKGICRAYDTEDCKLNQTNqidlqahkKKQSKNKITSFQFSPVNpSEVLVTSADSRIRILDG--SEVIHKFKGF 626
           55569***************************99999999999999999777999*******996669999**********998..678******* PP
   S: 222  tdnvksvrfs..pnderlvsgssDgsiriW.......dlrsgdllktlqlh 263
           +++ +++ +s  +++++++++s+D ++++W        +++g   ++++++
   Q: 627  RNTSSQISASysQDGKYIICASEDSQVYMWkrdshrtSSETGRRSSNTTQS 677
           ******999999******************554444433333333333333 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MANSSSDEEE EEDFDDCRHS FSSAVSSMTS ASRKFRTSTT MMSPDYDIWM AAPGSISERR 60
RRLLHGMGLA SNKDMVNAVS IRRVISNAAI LDNNNNNNHN NNKNGEVETE DHDNALFARS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAAACT CCTCCTCCGA CGAGGAGGAA GAAGAGGATT TCGACGACTG CCGCCACTCC 60
TTCTCCTCCG CCGTCTCCTC CATGACCTCC GCCTCACGAA AGTTCCGTAC ATCAACCACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR003143--Cyt_cd1_C
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006220	Arabidopsis lyrata	82.22	0.00e+00	1298.00
IUUC-Ath-007022	Arabidopsis thaliana	81.91	0.00e+00	1270.00
IUUC-Bol-015370	Brassica oleracea	94.63	0.00e+00	1373.00
IUUC-Fox-037744	Fusarium oxysporum	43.09	1.00e-35	143.00
IUUC-Pop-099373	Populus trichocarpa	56.03	0.00e+00	894.00
IUUC-Ppe-101329	Prunus persica	52.64	0.00e+00	778.00
IUUC-Sly-111902	Solanum lycopersicum	50.22	0.00e+00	723.00
IUUC-Tca-121856	Theobroma cacao	59.32	0.00e+00	820.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence