iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121527

Ensembl Protein ID

EOY07584

UniProt Accession

A0A061EZ85; A0A061EZ85_THECC

Genbank Protein ID

EOY07584.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM001883

Gene Name

TCM_021979

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_021979	EOY07584	EOY07584

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.10e-28	100.0	522	594
E3 adaptor/Cullin RING/DCX/DWD	2.30e-10	41.3	1259	1289

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedl.vPnltlrrliqawceens 73
           +p++f+CpI++++++dPv+l++G+ty+r++Ie+wl++g++tcP+trqpl+++ l + n++l+rli +w e++ 
   Q: 522  PPKDFVCPITGQIFNDPVTLETGQTYERKAIEEWLNRGNTTCPITRQPLSSSALpKTNYVLKRLITSWKEQHP 594
           699*******************************************************************996 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           H   vtcl   s+ ++l sGs D+ti++W l
   Q: 1259 HMKAVTCLYVpSSgDRLYSGSLDKTIRIWAL 1289
           7788****668556***************87 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MAGNYRFVMD QKDIVRTLIT TVGSFTQDRL INKEQRIQHK EQCAERLAAE DGSTDKDMEV 60
RYSDQAVLAN LDWGIEALEE AINTSNVETK HARLDYAEKM LQVCAMLTSD QKTAGVPNSY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CATTTTTCTT GATGAAAATG GAGACTTGAT GTACTAGTCC TGCACTTTTG AGTAAGGAGT 60
CTAGAGGCCT AGGAAAGATG GCTGGAAACT ATAGGTTTGT GATGGACCAG AAAGATATTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04564--U-box
PF00400--WD40

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002925	Amborella trichopoda	64.77	0.00e+00	666.00
IUUC-Gma-042764	Glycine max	66.47	0.00e+00	1974.00
IUUC-Mtr-057843	Medicago truncatula	65.09	0.00e+00	1876.00
IUUC-Pop-099454	Populus trichocarpa	67.44	0.00e+00	2024.00
IUUC-Ppe-101141	Prunus persica	70.07	0.00e+00	2119.00
IUUC-Smo-109666	Selaginella moellendorffii	40.18	6.00e-179	620.00
IUUC-Sly-111208	Solanum lycopersicum	63.35	0.00e+00	1849.00
IUUC-Stu-112377	Solanum tuberosum	61.72	0.00e+00	1783.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence