iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-098949

Ensembl Protein ID

POPTR_0006s22560.2

UniProt Accession

B9HBX4; B9HBX4_POPTR

Genbank Protein ID

EEE91982.1; ERP59766.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000342; CM000342

Gene Name

POPTRDRAFT_561472; POPTR_0006s225601g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s22560	POPTR_0006s22560.2	POPTR_0006s22560.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-17	63.8	165	195

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclafsd.tllvsGsdDgtikvWDlr 31
           H  +v+++++ + ++++s s+Dg+++v+Dlr
   Q: 165  HDKEVFDISWGSfNIFASVSGDGSVRVFDLR 195
           8899******4459***************97 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MQSSSEKRPG IYTYIAQWPI YSLAWSVRQD KKSRLAIGSF LEDYSNKVEI VQFNRDTSDF 60
TTDSRLIFDH PYSPTNLMFF PSEDAANPDI IATSGDYLRI WQIHDDRIEL KSLLNGNKSS 120

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Nucleotide Sequence
(Fasta)

CAAGCTTCTG TGCAAAATAC ACACATCAAC TCCACTTCTC CTCCCCCCTC TTCTTGTGCA 60
CAAGCAGAAT CATCCTCTTC GCTGATCTTG AGTGCTGTAA GTTTCTCTTT ATCTCGTAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

pop:POPTR_0006s225601

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ago-007732	Ashbya gossypii	31.35	2.00e-44	172.00
IUUC-Ppe-101603	Prunus persica	81.16	4.00e-143	499.00
IUUC-Sce-106252	Saccharomyces cerevisiae	30.66	1.00e-45	177.00
IUUC-Tca-121058	Theobroma cacao	77.78	2.00e-162	564.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence