iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099498

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000352

Gene Name

POPTRDRAFT_576498; POPTR_0016s07020g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0016s07020	POPTR_0016s07020.1	POPTR_0016s07020.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.90e-32	112.3	5	80

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwl.asggktcPvtrqpl.teedlvPnltlrrliqawceenss 74
           evp +f+CpI l++M+dPv++ +Gitydr+sIe+wl  s ++tcPvt+q+l +++dl+Pn+tlrrliqawc en+s
   Q: 5    EVPRFFICPIYLQIMKDPVTTITGITYDRESIERWLfTSENTTCPVTKQSLpKDSDLTPNHTLRRLIQAWCTENAS 80
           69**********************************666666*********99999*****************986 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDDIEVPRFF ICPIYLQIMK DPVTTITGIT YDRESIERWL FTSENTTCPV TKQSLPKDSD 60
LTPNHTLRRL IQAWCTENAS HGVDRIPTPK PCLDKAYVLK LIKNLSHHKL QIEALTQMEV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATGATA TTGAAGTTCC AAGATTTTTT ATCTGCCCAA TCTATCTCCA AATCATGAAA 60
GACCCAGTTA CAACCATAAC TGGCATCACA TATGATCGAG AAAGCATCGA GCGTTGGCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0016s07020g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006382	Arabidopsis lyrata	46.22	2.00e-98	352.00
IUUC-Ath-007017	Arabidopsis thaliana	45.79	9.00e-98	350.00
IUUC-Bol-016395	Brassica oleracea	46.07	3.00e-98	351.00
IUUC-Bra-017316	Brassica rapa	46.26	4.00e-97	347.00
IUUC-Mtr-057873	Medicago truncatula	60.96	5.00e-143	500.00
IUUC-Ppe-101540	Prunus persica	62.00	5.00e-153	533.00
IUUC-Tca-121295	Theobroma cacao	65.92	2.00e-155	541.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence