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Tag Content
iUUCD ID IUUC-Bra-017100
Ensembl Protein ID Bra020567.1-P
UniProt Accession M4DVM3; M4DVM3_BRARP
Protein Name Uncharacterized protein
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra020567 Bra020567.1 Bra020567.1-P
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 4.10e-27 94.1 403 435
UBD/Beta-Prp 1.50e-43 150.1 361 608
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDl 30
    H + v++laf ++ l +v+++dD+ ikvWD+
   Q: 403 HMGAVNDLAFaiPNrQLcVVTCGDDKLIKVWDV 435
    9999********875444799***********7 PP
   


   UBD/Beta-Prp

   S: 11   svitcvkfspdksllatgsrdgtikvwdvttgkl...lrslsgheaevtavkfs.pdgk.ilvtgseDrtikvwdlstgkcvhtlkghedsvlsls 101
    s +t v++spd++++ +++ + + ++ ++ ++ +++ h ++v+++ f p+++ vt+++D++ikvwd++ +k + t++ghe v+s+
   Q: 361 S-VTRVAWSPDGNFIGVAYSKHLVHLYAFSGPNDlrqHAEIDAHMGAVNDLAFAiPNRQlCVVTCGDDKLIKVWDVQGRKHF-TFEGHETPVYSIC 454
    3.555999**********************9998555566799********99624444799***************99987.8**********98 PP
   S: 102 fsp..sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl....ktgkllrtltgghtdsvyslsfdsn 191
    + + +++ s+ d i+ w ++ + +++ ++ +++ ++ dg+ l+s+++ + ++ + + g++ rt g h++ ++fd +
   Q: 455 PHHkeNIQFIFSTAIDGKIKAWLYDNMGSRVDYDAP-GKWCTTMLYSADGSRLFSCGTSKDGDFFLVewneSEGSIKRTYLGFHKKLAGVVQFDTS 549
    8776666***************99987777756665.55999999999999999998755444444444439************************ PP
   S: 192 gkelvsgsldgtvklwdlqtgecvrtlnght..dnvksvrfspnderlvsgssDgsiri 248
    +++++++++dg++k+wd+ + +++ + + +vrf +++++l++ ++D+ +i
   Q: 550 KNHFLAVGEDGQIKFWDMDNINVLTSTDAEGglPALPRVRFNREGNLLAVSTADNGFKI 608
    *******************9999888777762234457888899999988888887665 PP
   

Organism Brassica rapa
Protein Sequence
(Fasta)
MSSLSRELVF LILQFLEEEK FNESVHRLEK ESGFFFNTKY FDEKVLAGEW NEVEKYLSGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDRQDK AKAVEILVQD LRVFSTFNED LYKEITQLLT 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Bra-017100|E3,WD_repeat;UBD,Beta-Prp|Brassica rapa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGTCATCGC TAAGCCGAGA GCTGGTGTTT CTGATTCTGC AATTTCTAGA GGAAGAGAAA 60
TTCAACGAGT CTGTGCACAG GTTAGTCTAG AAGAAGTTCA ATTGAAAATT CCAAAATTAT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Bra-017100|E3,WD_repeat;UBD,Beta-Prp|Brassica rapa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ath-007641 Arabidopsis thaliana 84.12 0.00e+00 1966.00
IUUC-Bol-016367 Brassica oleracea 92.83 0.00e+00 2132.00
IUUC-Gma-042940 Glycine max 72.55 0.00e+00 1704.00
IUUC-Mtr-058168 Medicago truncatula 72.06 0.00e+00 1704.00
IUUC-Pop-099188 Populus trichocarpa 73.86 0.00e+00 1707.00
IUUC-Ppe-102061 Prunus persica 73.81 0.00e+00 1722.00
IUUC-Tca-121768 Theobroma cacao 74.14 0.00e+00 1729.00
Created Date 25-Jun-2017

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