iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112369

Ensembl Protein ID

PGSC0003DMT400063603

UniProt Accession

M1CAV5; M1CAV5_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400024727	PGSC0003DMT400063602	PGSC0003DMT400063602
PGSC0003DMG400024727	PGSC0003DMT400063603	PGSC0003DMT400063603

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.40e-30	102.8	453	485
UBD/Beta-Prp	1.00e-44	154.2	411	658

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDl 30
           H++sv++laf  ++  l +v+++dD+ ikvWD+
   Q: 453  HAGSVNDLAFayPNkQLcIVTCGDDKLIKVWDI 485
           9***********7753359*************6 PP

UBD/Beta-Prp

   S: 11   svitcvkfspdksllatgsrdgtikvwdvttgkl...lrslsgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkghe 94
           sv + v++spd++++ +++  + + ++ +   +      ++  h + v+++ f    k   +vt+++D++ikvwd+  +k +  ++ghe
   Q: 411  SV-SRVAWSPDGTFVGVAFSKHLVHLYATVGTNDlrqHLEMDAHAGSVNDLAFAYPNKqlCIVTCGDDKLIKVWDITGRKLF-NFEGHE 497
           33.44899*******************99887762333345889999******96666689**************9777655.79**** PP
   S: 95   dsvlslsfsp..sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGsl....DrtvrlWdlktgkllrtltg 177
           + v+s+  ++  s +++ s+  d  i+ w  ++     + +++  ++ +++ ++ dg  l+s+++    D+++  W+ + g + rt +g
   Q: 498  APVYSICPHQkeSIQFIFSTAIDGKIKAWLYDNMGSRVDYDAPG-HWCTTMLYSADGTRLFSCGTgkegDSFLVEWNESEGAIKRTYSG 585
           *********98555***************998877777555554.477777778878777777654445999999999*********** PP
   S: 178  ghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvk..svrfspnderlvsgssDgsiri 248
             ++s   ++fd ++++++++++d+++k+wd+ + +++ t  +    ++  ++rf +++++l+++++D+ i+i
   Q: 586  FRKKSAGVVQFDTTQNHFLAVGEDSQIKFWDMDNINILTTIDADGGLPSlpRLRFNKEGNLLAVTTADNGIKI 658
           **************************************999998876652268888***************98 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLEEEK FKESVHKLEQ ESGFFFNMKY FEEKVHAGEW DEVEKYLSGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDKQDK AKAVEILVSD LKVFSTFNED LYKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTTCTCTCT CTATATACCT ATTCTCTTTC TCTCTCTCTC TCTCTCTAAA TATATATAAT 60
TTCTCTTTCT TCTTCGGCAG CCTTTGGAAA TCAAGCACTG ATTTATTAAT TGTTTATGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002904	Amborella trichopoda	70.21	0.00e+00	1210.00
IUUC-Aly-006246	Arabidopsis lyrata	73.86	0.00e+00	1647.00
IUUC-Ath-007641	Arabidopsis thaliana	72.54	0.00e+00	1690.00
IUUC-Bdi-014677	Brachypodium distachyon	72.53	0.00e+00	1647.00
IUUC-Bol-015826	Brassica oleracea	72.82	0.00e+00	1612.00
IUUC-Bra-017791	Brassica rapa	73.09	0.00e+00	1619.00
IUUC-Gma-042940	Glycine max	84.19	0.00e+00	1909.00
IUUC-Hvu-047370	Hordeum vulgare	72.42	0.00e+00	1678.00
IUUC-Lpe-050951	Leersia perrieri	72.03	0.00e+00	1618.00
IUUC-Mtr-057701	Medicago truncatula	81.70	0.00e+00	1852.00
IUUC-Mac-064999	Musa acuminata	69.28	0.00e+00	1662.00
IUUC-Oba-075415	Oryza barthii	73.64	0.00e+00	1688.00
IUUC-Obr-076726	Oryza brachyantha	73.53	0.00e+00	1695.00
IUUC-Ogl-077810	Oryza glaberrima	73.64	0.00e+00	1688.00
IUUC-Ogu-078090	Oryza glumaepatula	73.64	0.00e+00	1688.00
IUUC-Oin-080158	Oryza indica	73.53	0.00e+00	1686.00
IUUC-Olo-080271	Oryza longistaminata	72.85	0.00e+00	1651.00
IUUC-Ome-081965	Oryza meridionalis	73.82	0.00e+00	1678.00
IUUC-Oni-082421	Oryza nivara	73.56	0.00e+00	1688.00
IUUC-Opu-083912	Oryza punctata	73.64	0.00e+00	1687.00
IUUC-Oru-085201	Oryza rufipogon	73.64	0.00e+00	1688.00
IUUC-Osa-086161	Oryza sativa	73.64	0.00e+00	1688.00
IUUC-Pop-099188	Populus trichocarpa	79.84	0.00e+00	1850.00
IUUC-Ppe-101491	Prunus persica	76.77	0.00e+00	1733.00
IUUC-Sit-110487	Setaria italica	73.23	0.00e+00	1655.00
IUUC-Sly-111169	Solanum lycopersicum	99.29	0.00e+00	2206.00
IUUC-Sbi-113873	Sorghum bicolor	73.14	0.00e+00	1655.00
IUUC-Tca-121768	Theobroma cacao	81.29	0.00e+00	1876.00
IUUC-Tae-125707	Triticum aestivum	71.94	0.00e+00	1667.00
IUUC-Tur-126477	Triticum urartu	67.99	0.00e+00	1633.00
IUUC-Vvi-131297	Vitis vinifera	82.52	0.00e+00	1902.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence