iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-120993

Ensembl Protein ID

EOY25938

UniProt Accession

A0A061G932; A0A061G932_THECC

Genbank Protein ID

EOY25938.1

Protein Name

TOPLESS-related 1 isoform 1

Genbank Nucleotide ID

CM001884

Gene Name

TCM_027304

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_027304	EOY25938	EOY25938

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.20e-08	34.1	305	335

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH+ ++t+laf +  + lvs++ D ++ vW+
   Q: 305  GHSKRITGLAFsHVlNVLVSSGADSQLCVWN 335
           8**********633789*************9 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MSGLGRDETN WHPYRVCNEP TRQQKGFNSK PLITKHSTPN PRIRPIRPQP QTVGIAQPFA 60
SAHLHKNGRK FTRLGRLAEA PKPTINPISA ATAAGIADRG ASVVTIAAMN GDAWSLGNVE 120

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Nucleotide Sequence
(Fasta)

GTAAAATTTT GCAGCTTGAC AATCAAGATA TGTGATCTGA GAACAATATG CAAAGATGTA 60
GATTTAACAT ATTTTGTCAG ATACAATCTA AGGTAAATGT CATACTAGTA TTTGATAGTT 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR027728--Topless_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0006355--P:regulation of transcription, DNA-templated

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence