iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121786

Ensembl Protein ID

EOY26006

UniProt Accession

A0A061G8W4; A0A061G8W4_THECC

Genbank Protein ID

EOY26006.1

Protein Name

Transducin/WD40 repeat-like superfamily protein isoform 2

Genbank Nucleotide ID

CM001884

Gene Name

TCM_027395

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_027395	EOY26006	EOY26006
TCM_027395	EOY26005	EOY26005

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.10e-24	84.0	113	150
UBD/Beta-Prp	2.40e-50	172.3	71	318

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H +++  +a+ ++ +llv+Gs+D+t+k WD+r+ ++++
   Q: 113  HDAPIKEVAWiPEmNLLVTGSWDKTLKYWDTRQPNPVH 150
           889999*****999******************998887 PP

UBD/Beta-Prp

   S: 51   heaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnl 151
           h+++v + ++++dg +  +g+ D+ +k w+l +g + +t+  h++ +  +++ p+ + lv+Gs+d+t++ wd+++   ++ t++  d   +c ++  +  l
   Q: 71   HDQPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPIKEVAWIPEMNLLVTGSWDKTLKYWDTRQPNPVH-TQQLPD---RCYALTVKYPL 167
           99*****************************************************************************9.777777...5666666667* PP
   S: 152  lvsGslDrtvrlWdlktgkllrtl..tgghtdsvyslsfdsngkelvsgsldgtvklwdlq..tgecvrtlnght.....dnvksvrfspnderlvsgssD 243
           +v G++Dr + +++l++ +  ++   +   + + ++++  ++++ ++ gs  g+v +  l   +++   t+++h+       v+s++f+p ++ +++++sD
   Q: 168  MVVGTADRNLIVFNLQNPQTEYKRvvSP-LKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDdgQQNKNFTFKCHRdgseiYSVNSLNFHPIHHTFATAGSD 267
           ***************5555444333233.6667778888888999999999999999999977677799******9999999******************* PP
   S: 244  gsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgse.dskvniwkl 294
           g  ++Wd++s++ lk++++   + i++++++ ++++++   +    v+++k 
   Q: 268  GAFNFWDKDSKQRLKAMSRCS-QPIPCSTFNNDGSIFAYSVFvMTGVRVLKI 318
           ******************966.555555546666666555445556666665 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MSTFGAAAAN HNPNKSFEVL QPPSDSVSSL SFSPKANILV ATSWDNQQVR CWEISRNGTA 60
VASTPKASIT HDQPVLCSTW KDDGTTVFSG GCDKQVKMWP LLSGGQPMTV AMHDAPIKEV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAATGCTTA CTAGCGGAAC GGACGCGGTG ATGAGGGCGT CCATCCAACG CAACGCGTGC 60
TCTCCTTAAA CCTACACCGC TTCGCACCGC AACAACGAAC TTCCCCCATT ATATAAAAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence