iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107674

Ensembl Protein ID

EEB05556

UniProt Accession

B6JW05; B6JW05_SCHJY

Genbank Protein ID

EEB05556.1

Protein Name

U3 snoRNP-associated protein Utp1

Genbank Nucleotide ID

KE651166

Gene Name

SJAG_00572

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_00572	EEB05556	EEB05556

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-30	101.4	466	496
UBD/Beta-Prp	3.50e-64	214.8	242	446

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH+++++ l+f +d + l+sGs+D+t++vWD
   Q: 466  GHQGPISTLSFsNDsGVLASGSWDKTVRVWD 496
           8***********989**************** PP

UBD/Beta-Prp

   S: 36   vwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGsh.drtirvwdletgqcleetlsg 135
           +w +++  +   + +++++ ++  f+p +++lv g + ++  ++++ ++ +++ l+  ++s+ ++s+++ g+++++Gs+    + vw++++++ +   ++ 
   Q: 242  IWMIKDRHY---FMQQNSFLRSAAFHPATNLLVVGFSNGLFSLYEMPSFNMLYQLSVAQSSIDTISIDKRGEWIAIGSSkLGQLLVWEWQSESYIL-KQQA 338
           565555333...566666777788888888888888888888888888888888888888888888888778888876414667778888877777.7777 PP
   S: 136  hdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlng.htdnvksvrfspnde 235
           h +v ++++++pdg+ +v++++D++++lWdl +g+ + t+t+ ht +v+ + f + g+ l s sldg+v+ wdl + +  rt+++  + ++++v+++p +e
   Q: 339  HYDVLSSLAYSPDGQRVVTSADDGKLKLWDLHSGFSIVTFTQ-HTAAVTGICFAKRGNVLFSSSLDGSVRAWDLIRYRNFRTFTApSRVQFSCVAVDPAGE 438
           888888888888888888888888888888888888888877.8888888888888888888888888888888877778888874456777888887777 PP
   S: 236  rlvsgssD 243
           ++  gs+D
   Q: 439  IVCAGSQD 446
           77777776 PP

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MKTDFQFSNF LGTVYTKGNL VFTPDGFTVL SPVGNRVTAF NLKDNKSFTF PFENRKNITQ 60
IALSPQATLM MTVDEDGRAI LSNFVRRNAL YYFNFKSPVR AIEFAPNGRY FAVAIGKLVQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAGATTGAT AAAGAGAAAA CGAGCGTAAT ATTGAAATAA CTACATGCAA TATGTAGGAG 60
TTGTTATTAT TAAGGAAACA TGTAGTTGCC CAAAAATAAT TAGTAGAGAA TGCTTATTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027145--PWP2
IPR011044--Quino_amine_DH_bsu
IPR011047--Quinoprotein_ADH-like_supfam
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000920--P:cell separation after cytokinesis
GO:0000480--P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000447--P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472--P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0030010--P:establishment of cell polarity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001932	Ailuropoda melanoleuca	42.74	0.00e+00	743.00
IUUC-Atr-003033	Amborella trichopoda	43.56	1.00e-165	575.00
IUUC-Apl-003219	Anas platyrhynchos	43.99	0.00e+00	759.00
IUUC-Aca-004950	Anolis carolinensis	43.37	0.00e+00	762.00
IUUC-Aly-006213	Arabidopsis lyrata	39.80	0.00e+00	650.00
IUUC-Ath-006593	Arabidopsis thaliana	39.46	0.00e+00	653.00
IUUC-Ago-007916	Ashbya gossypii	51.79	0.00e+00	909.00
IUUC-Acl-008225	Aspergillus clavatus	55.09	0.00e+00	1011.00
IUUC-Afl-008390	Aspergillus flavus	54.43	0.00e+00	1010.00
IUUC-Afu-009039	Aspergillus fumigatus	54.63	0.00e+00	1004.00
IUUC-Ani-009228	Aspergillus nidulans	50.68	0.00e+00	890.00
IUUC-Ang-009663	Aspergillus niger	54.95	0.00e+00	991.00
IUUC-Aor-009923	Aspergillus oryzae	54.43	0.00e+00	1010.00
IUUC-Ate-010264	Aspergillus terreus	55.84	0.00e+00	1020.00
IUUC-Ame-010790	Astyanax mexicanus	37.65	3.00e-81	293.00
IUUC-Bgr-012066	Blumeria graminis	51.17	0.00e+00	966.00
IUUC-Bta-012399	Bos taurus	42.57	0.00e+00	715.00
IUUC-Bci-013757	Botrytis cinerea	55.01	0.00e+00	979.00
IUUC-Bdi-015028	Brachypodium distachyon	41.36	0.00e+00	686.00
IUUC-Bol-016521	Brassica oleracea	39.34	0.00e+00	640.00
IUUC-Bra-017096	Brassica rapa	39.30	0.00e+00	642.00
IUUC-Cel-018690	Caenorhabditis elegans	34.02	8.00e-157	545.00
IUUC-Cja-019229	Callithrix jacchus	42.66	0.00e+00	737.00
IUUC-Cfa-020504	Canis familiaris	42.86	0.00e+00	741.00
IUUC-Cpo-021574	Cavia porcellus	43.20	0.00e+00	758.00
IUUC-Cre-022756	Chlamydomonas reinhardtii	46.75	6.00e-153	533.00
IUUC-Csa-023436	Chlorocebus sabaeus	42.92	0.00e+00	731.00
IUUC-Cin-025397	Ciona intestinalis	41.13	3.00e-169	586.00
IUUC-Csv-026194	Ciona savignyi	45.05	7.00e-137	479.00
IUUC-Cgl-026684	Colletotrichum gloeosporioides	54.66	0.00e+00	978.00
IUUC-Cne-027031	Cryptococcus neoformans	50.11	0.00e+00	949.00
IUUC-Cme-027276	Cyanidioschyzon merolae	34.86	6.00e-80	290.00
IUUC-Dre-027514	Danio rerio	42.07	0.00e+00	702.00
IUUC-Dno-029191	Dasypus novemcinctus	41.93	7.00e-180	622.00
IUUC-Dor-030149	Dipodomys ordii	43.02	0.00e+00	739.00
IUUC-Dse-031260	Dothistroma septosporum	53.37	0.00e+00	643.00
IUUC-Dme-032043	Drosophila melanogaster	39.36	0.00e+00	675.00
IUUC-Ete-033102	Echinops telfairi	50.10	4.00e-155	539.00
IUUC-Eca-033223	Equus caballus	42.91	0.00e+00	745.00
IUUC-Fca-035795	Felis catus	41.23	0.00e+00	692.00
IUUC-Fal-036830	Ficedula albicollis	41.80	0.00e+00	736.00
IUUC-Fox-037835	Fusarium oxysporum	54.58	0.00e+00	974.00
IUUC-Fso-038324	Fusarium solani	54.22	0.00e+00	973.00
IUUC-Gmo-039355	Gadus morhua	41.40	0.00e+00	726.00
IUUC-Ggr-039840	Gaeumannomyces graminis	54.45	0.00e+00	944.00
IUUC-Gga-040907	Gallus gallus	50.00	3.00e-158	549.00
IUUC-Gac-042624	Gasterosteus aculeatus	42.19	0.00e+00	717.00
IUUC-Gma-043034	Glycine max	39.66	0.00e+00	698.00
IUUC-Hsa-046145	Homo sapiens	42.81	0.00e+00	748.00
IUUC-Hvu-047416	Hordeum vulgare	40.69	0.00e+00	690.00
IUUC-Itr-049083	Ictidomys tridecemlineatus	43.21	0.00e+00	751.00
IUUC-Kpa-049150	Komagataella pastoris	52.91	0.00e+00	939.00
IUUC-Lch-049460	Latimeria chalumnae	43.61	0.00e+00	650.00
IUUC-Lpe-050840	Leersia perrieri	43.88	3.00e-160	557.00
IUUC-Loc-052733	Lepisosteus oculatus	43.14	0.00e+00	754.00
IUUC-Lma-053277	Leptosphaeria maculans	55.06	0.00e+00	994.00
IUUC-Laf-054294	Loxodonta africana	44.68	0.00e+00	736.00
IUUC-Mcc-054624	Macaca mulatta	42.81	0.00e+00	749.00
IUUC-Meu-056665	Macropus eugenii	38.87	1.00e-137	481.00
IUUC-Mor-057288	Magnaporthe oryzae	53.98	0.00e+00	959.00
IUUC-Mpo-057594	Magnaporthe poae	54.33	0.00e+00	948.00
IUUC-Mtr-058700	Medicago truncatula	41.39	0.00e+00	723.00
IUUC-Mla-058846	Melampsora laricipopulina	46.15	0.00e+00	830.00
IUUC-Mga-059207	Meleagris gallopavo	38.49	2.00e-180	624.00
IUUC-Mvi-060327	Microbotryum violaceum	52.08	0.00e+00	940.00
IUUC-Mmr-061264	Microcebus murinus	43.25	0.00e+00	725.00
IUUC-Mdo-062327	Monodelphis domestica	43.59	0.00e+00	754.00
IUUC-Mmu-063542	Mus musculus	42.92	0.00e+00	724.00
IUUC-Mac-065142	Musa acuminata	42.14	0.00e+00	704.00
IUUC-Mpu-066098	Mustela putorius furo	41.94	0.00e+00	629.00
IUUC-Mlu-067056	Myotis lucifugus	39.80	0.00e+00	635.00
IUUC-Nfi-068323	Neosartorya fischeri	54.48	0.00e+00	1012.00
IUUC-Ncr-068925	Neurospora crassa	55.54	0.00e+00	1025.00
IUUC-Nle-068970	Nomascus leucogenys	42.58	0.00e+00	741.00
IUUC-Opr-070966	Ochotona princeps	55.11	5.00e-109	386.00
IUUC-Ont-071252	Oreochromis niloticus	41.65	0.00e+00	716.00
IUUC-Oan-072737	Ornithorhynchus anatinus	48.25	3.00e-169	587.00
IUUC-Oba-075794	Oryza barthii	41.28	0.00e+00	675.00
IUUC-Obr-076617	Oryza brachyantha	41.12	0.00e+00	693.00
IUUC-Ogl-077022	Oryza glaberrima	41.66	0.00e+00	701.00
IUUC-Ogu-078757	Oryza glumaepatula	35.01	1.00e-144	505.00
IUUC-Oin-079813	Oryza indica	41.56	0.00e+00	694.00
IUUC-Olo-080265	Oryza longistaminata	41.32	0.00e+00	697.00
IUUC-Ome-081494	Oryza meridionalis	41.68	0.00e+00	697.00
IUUC-Oni-082639	Oryza nivara	35.01	1.00e-144	504.00
IUUC-Opu-084005	Oryza punctata	41.43	0.00e+00	702.00
IUUC-Oru-084883	Oryza rufipogon	34.89	9.00e-144	502.00
IUUC-Osa-086158	Oryza sativa	41.56	0.00e+00	695.00
IUUC-Ola-086822	Oryzias latipes	42.17	0.00e+00	723.00
IUUC-Olu-087741	Ostreococcus lucimarinus	29.69	2.00e-22	95.90
IUUC-Oga-088887	Otolemur garnettii	43.08	0.00e+00	719.00
IUUC-Oar-090110	Ovis aries	41.40	0.00e+00	676.00
IUUC-Pan-092808	Papio anubis	43.73	0.00e+00	757.00
IUUC-Psi-093954	Pelodiscus sinensis	43.87	0.00e+00	769.00
IUUC-Pno-094922	Phaeosphaeria nodorum	54.52	0.00e+00	1005.00
IUUC-Ppa-095678	Physcomitrella patens	42.76	0.00e+00	681.00
IUUC-Pfo-097175	Poecilia formosa	41.32	0.00e+00	740.00
IUUC-Pab-098155	Pongo abelii	43.05	0.00e+00	753.00
IUUC-Pop-099635	Populus trichocarpa	40.20	0.00e+00	689.00
IUUC-Pca-100947	Procavia capensis	40.70	0.00e+00	681.00
IUUC-Ppe-101552	Prunus persica	41.70	0.00e+00	718.00
IUUC-Pva-102744	Pteropus vampyrus	39.34	1.00e-179	621.00
IUUC-Pgr-103389	Puccinia graminis	47.77	0.00e+00	834.00
IUUC-Ptt-103953	Puccinia triticina	42.45	0.00e+00	680.00
IUUC-Pte-104079	Pyrenophora teres	54.71	0.00e+00	987.00
IUUC-Pyt-104656	Pyrenophora triticirepentis	54.47	0.00e+00	983.00
IUUC-Rno-105502	Rattus norvegicus	42.82	0.00e+00	747.00
IUUC-Sce-106390	Saccharomyces cerevisiae	52.71	0.00e+00	961.00
IUUC-Sha-107264	Sarcophilus harrisii	41.77	2.00e-88	317.00
IUUC-Spo-108348	Schizosaccharomyces pombe	72.85	0.00e+00	1346.00
IUUC-Smo-109327	Selaginella moellendorffii	41.49	0.00e+00	717.00
IUUC-Sit-110304	Setaria italica	41.84	0.00e+00	721.00
IUUC-Sly-111620	Solanum lycopersicum	46.03	3.00e-155	539.00
IUUC-Stu-112877	Solanum tuberosum	41.17	0.00e+00	729.00
IUUC-Sbi-114702	Sorghum bicolor	41.79	0.00e+00	704.00
IUUC-Sre-115129	Sporisorium reilianum	47.33	0.00e+00	862.00
IUUC-Ssc-115931	Sus scrofa	41.41	4.00e-89	319.00
IUUC-Tgu-116787	Taeniopygia guttata	42.58	0.00e+00	744.00
IUUC-Tru-118218	Takifugu rubripes	41.76	0.00e+00	721.00
IUUC-Tsy-119401	Tarsius syrichta	45.73	3.00e-121	427.00
IUUC-Tni-120046	Tetraodon nigroviridis	41.87	0.00e+00	691.00
IUUC-Tca-121685	Theobroma cacao	42.23	0.00e+00	735.00
IUUC-Tre-122154	Trichoderma reesei	56.31	0.00e+00	1012.00
IUUC-Tvi-122451	Trichoderma virens	55.33	0.00e+00	1006.00
IUUC-Tae-125397	Triticum aestivum	41.36	4.00e-117	414.00
IUUC-Tur-126650	Triticum urartu	41.30	0.00e+00	645.00
IUUC-Tme-127005	Tuber melanosporum	58.27	0.00e+00	1032.00
IUUC-Tbe-128102	Tupaia belangeri	43.10	1.00e-128	452.00
IUUC-Ttr-128259	Tursiops truncatus	44.43	0.00e+00	726.00
IUUC-Uma-129511	Ustilago maydis	47.78	0.00e+00	848.00
IUUC-Vda-129833	Verticillium dahliae	50.69	0.00e+00	885.00
IUUC-Vvi-131572	Vitis vinifera	40.65	0.00e+00	679.00
IUUC-Xtr-131776	Xenopus tropicalis	33.84	1.00e-58	218.00
IUUC-Xma-133887	Xiphophorus maculatus	41.87	0.00e+00	707.00
IUUC-Yli-134427	Yarrowia lipolytica	54.21	0.00e+00	998.00
IUUC-Zma-135980	Zea mays	41.81	0.00e+00	694.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence