iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111754

Ensembl Protein ID

Solyc12g044320.1.1

UniProt Accession

K4DFC0; K4DFC0_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc12g044320.1	Solyc12g044320.1.1	Solyc12g044320.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.90e-29	100.2	391	432
UBD/Beta-Prp	4.00e-52	178.0	212	445

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcla.f........sd.tllvsGsdDgtikvWDlrt 32
           gH ++++c+a f         d +++++Gs Dg+ik+W++r+
   Q: 391  GHRGPIRCVAaFprlvneenEDgCTVCTGSLDGVIKMWRVRR 432
           8********779****999744699**************985 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw..dlstgkcvhtlk....g 92
           +h ++i+++++  ++++l ++s d+t+kvw++++ k++++++ h+++++++   +dg +l t+s+D+t++vw  ++ +g+  h+l+    +
   Q: 212  KHMGPISSLAINISDDILYSASLDKTVKVWRISDLKCIETIQAHNDPINDIVVGDDG-VLYTASDDATVRVWrrNFCSGDRPHSLTvtlpA 301
           577799999999999*****************************************9.**************8877777777776666669 PP
   S: 93   hedsvlslsfspsgdklvsGshdrtirvwdletgqclee.....tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl... 175
           + + v +l++  +g +l  G +d +i+ w   +g+ + +      l gh+++v+c++++   n++vsGs+D+t+r+W  +++++ +     
   Q: 302  KCSPVKTLALTSDGGVLYGGCSDGYIHYW--LKGWFSGQlqyggALLGHTHAVMCLASMA--NYVVSGSADSTCRVWFREQQDCQHVCvai 388
           99**************************9..5555555566789****************..*****************888887777777 PP
   S: 176  .tgghtdsvysls........fdsngkelvsgsldgtvklwdlqtgecvrtlnghtdn 224
            +g h +++++++         +++g  + +gsldg +k+w ++++++ ++ +g ++n
   Q: 389  lQG-HRGPIRCVAafprlvneENEDGCTVCTGSLDGVIKMWRVRRTSISDKGKGSSQN 445
           587.*********999987665556699****************99998888887766 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MASPIDLEPP NSLSSSAPSF AIRPNNNNNN HNNSFLRSIS TKEPLNFSEQ LAYTPPRIST 60
SALPSNTYSQ PSTPRLSFTL NNPSTKSVDG DDHPDFHQTS YRCISSVLKK DGQILSVAVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTTCAC CAATAGACCT TGAGCCTCCT AATTCACTAT CTTCTTCAGC TCCGTCTTTC 60
GCCATACGTC CTAATAATAA TAATAATAAT CACAACAACA GCTTCTTGCG AAGCATATCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

sly:101255969

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002624	Amborella trichopoda	46.12	9.00e-95	339.00
IUUC-Gma-043417	Glycine max	63.15	2.00e-149	521.00
IUUC-Mtr-058275	Medicago truncatula	60.35	1.00e-145	508.00
IUUC-Pop-099569	Populus trichocarpa	73.25	2.00e-107	380.00
IUUC-Ppe-101652	Prunus persica	67.61	2.00e-158	551.00
IUUC-Stu-112791	Solanum tuberosum	97.14	0.00e+00	880.00
IUUC-Tca-121239	Theobroma cacao	68.51	3.00e-159	553.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence