iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121239

Ensembl Protein ID

EOY26854

UniProt Accession

A0A061GB96; A0A061GB96_THECC

Genbank Protein ID

EOY26854.1; EOY26855.1; EOY26856.1

Protein Name

Transducin/WD40 repeat-like superfamily protein isoform 1

Genbank Nucleotide ID

CM001884; CM001884; CM001884

Gene Name

TCM_028834

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_028834	EOY26854	EOY26854

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.80e-27	92.8	397	437
UBD/Beta-Prp	1.40e-49	169.8	219	437

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcl.af........sd.tllvsGsdDgtikvWDlr 31
           gH ++++c+ af         d +++++Gs Dg++kvW+++
   Q: 397  GHRGPIRCVtAFlghsgeevEDgCTICTGSLDGVLKVWRVT 437
           8*******9459***9999955599**************86 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw..dlstgkcvhtlk....ghedsvlslsf 102
            h ++it++++  ++++l ++s d+t+kvw++++ k+++ +  h+++++a+   +dg il t+s+D+ti+vw  ++  g+  h+l     ++ + v +l++
   Q: 219  RHMGPITSLAVNISDNILYSASLDKTVKVWRISDLKCIENIPAHSEPINAIVVADDG-ILYTASDDATIRVWrrNFCRGEWPHSLMvtlpAKCSPVKTLTL 318
           57789***************************************************9.**************7766666665555544459********** PP
   S: 103  spsgdklvsGshdrtirvwdletgqclee.....tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl...ktgkllrtltgghtdsvysls........ 187
             +g +l  G  d +++ w   +g+ + +      l+gh+++v+c+++ +  n ++sGs+D+  r+W      +  +l  l g h +++++++        
   Q: 319  TGDGGVLYGGCTDGYVHYW--LKGWLSGQlryggALQGHTHAVMCLATVS--NFVISGSADSSSRVWTReqdGQHVCLAVLVG-HRGPIRCVTaflghsge 414
           *******************..6777776688889****************..*****************7767789*****99.**********8665555 PP
   S: 188  fdsng...kelvsgsldgtvklwdlq 210
                     + +gsldg +k+w + 
   Q: 415  E---VedgCTICTGSLDGVLKVWRVT 437
           2...055599*************986 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MASLDSPNSP PNSSFAIRET TTHPKTNVAS ILDPAPNSPP NPSFAVREST AHSFLRSIST 60
KEASFAGFHF SPPRYSTPSL HSTSPLSSPL RTFSPNPASN HTISLDASYK CLSSVLKKDG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAATTAGAA ACAATTAGAA AGCAACTCAA AAGTTCATGA AGTTGGAATG TGGTGAGAAG 60
TGAAGTGTTA GAATGGTTGA ATGATAAAAG TTAAGGATCT GGAGTGGTTT GGGAAATTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002624	Amborella trichopoda	46.15	8.00e-96	343.00
IUUC-Gma-043417	Glycine max	68.84	4.00e-156	543.00
IUUC-Mtr-058275	Medicago truncatula	64.56	2.00e-149	521.00
IUUC-Pop-099569	Populus trichocarpa	77.08	6.00e-113	399.00
IUUC-Ppe-101652	Prunus persica	70.02	4.00e-160	556.00
IUUC-Sly-111754	Solanum lycopersicum	67.88	9.00e-164	568.00
IUUC-Stu-112791	Solanum tuberosum	70.29	3.00e-160	557.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence