iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114427

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G071000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g006200	Sb10g006200.1	Sb10g006200.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.00e-07	33.1	140	182

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++  dg  +++lp CgH fh +C+ +w         +++CPlCr
   Q: 140  CAVCLSEVADGekVRTLPkCGHGFHVECIDMW------FHSHDTCPLCR 182
           ********55555*******************......9999******8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MIPQTSSVSS SASASAAPTP PVWPSPSGSG GDGMFPGSVS NSGGQQQLAI SNGVLLAAVI 60
FLFMVVVFVF LLYLYAKRYL GANPLLAPTS PSSRFLFVAA SPLPQRGLPA SVLRSLPVTV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGAGAAGCT CGTTCGTTCC TTGAAGCCAG GTGCCAGCCA TGATCCCCCA GACGTCCTCG 60
GTCTCTTCGT CGGCGTCGGC GTCGGCGGCG CCCACGCCGC CGGTGTGGCC CAGCCCCAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_10g006200

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003085	Amborella trichopoda	35.40	7.00e-28	116.00
IUUC-Aly-005421	Arabidopsis lyrata	41.94	3.00e-28	118.00
IUUC-Ath-006957	Arabidopsis thaliana	41.94	1.00e-28	119.00
IUUC-Bta-012597	Bos taurus	36.96	2.00e-15	77.00
IUUC-Bdi-014880	Brachypodium distachyon	69.44	3.00e-68	250.00
IUUC-Bol-015888	Brassica oleracea	40.88	7.00e-29	120.00
IUUC-Bra-016720	Brassica rapa	38.12	7.00e-29	120.00
IUUC-Dor-030800	Dipodomys ordii	38.54	4.00e-15	75.90
IUUC-Gma-044376	Glycine max	51.75	6.00e-27	113.00
IUUC-Hvu-047652	Hordeum vulgare	60.98	9.00e-59	219.00
IUUC-Itr-048447	Ictidomys tridecemlineatus	40.48	6.00e-14	72.00
IUUC-Lpe-051092	Leersia perrieri	64.58	5.00e-61	226.00
IUUC-Mtr-058409	Medicago truncatula	41.06	6.00e-30	123.00
IUUC-Mac-065123	Musa acuminata	48.44	2.00e-43	168.00
IUUC-Oba-074984	Oryza barthii	66.79	2.00e-56	211.00
IUUC-Ogl-077250	Oryza glaberrima	66.79	3.00e-56	211.00
IUUC-Ogu-078929	Oryza glumaepatula	66.91	5.00e-57	213.00
IUUC-Oin-079559	Oryza indica	66.79	2.00e-56	211.00
IUUC-Ome-081596	Oryza meridionalis	66.04	5.00e-52	197.00
IUUC-Oni-082758	Oryza nivara	66.04	3.00e-57	214.00
IUUC-Opu-083878	Oryza punctata	65.43	4.00e-56	210.00
IUUC-Oru-084427	Oryza rufipogon	66.79	2.00e-56	211.00
IUUC-Osa-086236	Oryza sativa	66.79	3.00e-56	211.00
IUUC-Oar-089523	Ovis aries	43.02	1.00e-14	73.90
IUUC-Pop-099297	Populus trichocarpa	48.95	5.00e-32	130.00
IUUC-Ppe-101773	Prunus persica	61.80	4.00e-29	120.00
IUUC-Smo-109206	Selaginella moellendorffii	53.75	3.00e-22	95.10
IUUC-Sly-111311	Solanum lycopersicum	41.27	1.00e-30	125.00
IUUC-Stu-112277	Solanum tuberosum	49.19	4.00e-30	124.00
IUUC-Tca-121232	Theobroma cacao	41.67	1.00e-30	125.00
IUUC-Tae-125140	Triticum aestivum	67.36	3.00e-58	218.00
IUUC-Vvi-131354	Vitis vinifera	49.26	2.00e-30	125.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence