iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014675

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000882

Gene Name

LOC100824705; BRADI_3g09000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G09000	BRADI3G09000.1	BRADI3G09000.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.50e-29	102.4	299	367

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawc 69
           +vp+ef CpIsl+lMrdPvv+++G+tydr sI +w+ +g++tcP  +q l+++ lvPn +lr+li++wc
   Q: 299  SVPKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIGEGHSTCPNSGQALADNRLVPNRALRSLISQWC 367
           59******************************************************************* PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MDAPPASSAS SPVEFLLRRP PPRRRRLPLA GAFFAPPGLA GAPLLRALAS LAAGLLAAPR 60
PPSQPRNLAA LARRLALLSA LLESILLDAP GCFSDAANLC FRELYVILFR AELLVSYVAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAAGGTTGA CATGTCAGCG GCAGCAGAGG GCGGGGAGGC CTAGAAGACC CAAACCGTGG 60
TCGGCCTCGT CCCCCTTCTT CTTCCTCCTT CCTCCTCCTC GCTTTCTTCT CCGGCTCCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity
GO:0009814--P:defense response, incompatible interaction

KEGG

bdi:100824705

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001129	Aegilops tauschii	88.16	0.00e+00	961.00
IUUC-Aly-006027	Arabidopsis lyrata	45.98	8.00e-141	493.00
IUUC-Ath-007054	Arabidopsis thaliana	46.23	7.00e-140	490.00
IUUC-Bol-015274	Brassica oleracea	46.15	5.00e-148	517.00
IUUC-Bra-017149	Brassica rapa	46.36	1.00e-153	536.00
IUUC-Gma-043020	Glycine max	48.61	5.00e-149	520.00
IUUC-Hvu-047822	Hordeum vulgare	87.96	0.00e+00	1098.00
IUUC-Lpe-051105	Leersia perrieri	81.52	0.00e+00	933.00
IUUC-Mtr-057764	Medicago truncatula	48.34	1.00e-142	499.00
IUUC-Mac-065609	Musa acuminata	49.66	2.00e-150	525.00
IUUC-Oba-075480	Oryza barthii	81.41	0.00e+00	860.00
IUUC-Obr-076773	Oryza brachyantha	81.52	1.00e-133	468.00
IUUC-Ogl-077156	Oryza glaberrima	82.49	0.00e+00	994.00
IUUC-Ogu-078640	Oryza glumaepatula	81.09	0.00e+00	999.00
IUUC-Oin-079253	Oryza indica	78.51	0.00e+00	951.00
IUUC-Olo-080903	Oryza longistaminata	81.23	0.00e+00	857.00
IUUC-Ome-081982	Oryza meridionalis	82.33	0.00e+00	994.00
IUUC-Oni-082824	Oryza nivara	81.09	0.00e+00	999.00
IUUC-Opu-083758	Oryza punctata	80.91	0.00e+00	955.00
IUUC-Oru-084718	Oryza rufipogon	81.09	0.00e+00	999.00
IUUC-Osa-085662	Oryza sativa	81.68	0.00e+00	938.00
IUUC-Pop-099239	Populus trichocarpa	48.08	1.00e-137	483.00
IUUC-Ppe-101890	Prunus persica	48.75	6.00e-136	477.00
IUUC-Sit-110022	Setaria italica	83.41	0.00e+00	961.00
IUUC-Sly-111463	Solanum lycopersicum	46.42	4.00e-129	454.00
IUUC-Stu-111976	Solanum tuberosum	46.42	3.00e-129	454.00
IUUC-Sbi-114100	Sorghum bicolor	80.74	0.00e+00	958.00
IUUC-Ssc-115592	Sus scrofa	23.30	2.00e-08	52.40
IUUC-Tca-121221	Theobroma cacao	48.67	1.00e-153	535.00
IUUC-Tae-124437	Triticum aestivum	88.18	0.00e+00	1107.00
IUUC-Tur-126627	Triticum urartu	89.50	0.00e+00	873.00
IUUC-Vvi-131159	Vitis vinifera	48.50	1.00e-136	479.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence