iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017296

Ensembl Protein ID

Bra010834.1-P

UniProt Accession

M4D2Y1; M4D2Y1_BRARP

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra010834	Bra010834.1	Bra010834.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.90e-31	108.0	292	364

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           vp++f+CpIsl+lM+dPv++++G+tydr+sI++w+++g+ tcP+t+q l ++ +vPn +l++li +wc+++++
   Q: 292  VPKDFVCPISLDLMSDPVIISTGQTYDRTSIARWIEEGHCTCPKTGQMLVDSRIVPNRALKNLIVQWCAASGV 364
           8*******************************************************************99875 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MATAAIFSSL RRRRSPSLEA FLSPVDLSGL PLVQTLAAIS TEIISSFSGT RFSFQRRNAR 60
SLIRKIEIFL VLFESLAESR WGSTPSSSSS SSSTALLCLK ELYLLLYRSK ILLDYGAHSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTACGG CAGCGATATT CTCATCTCTA CGACGGAGGA GATCGCCGTC GCTGGAAGCC 60
TTTCTATCCC CCGTTGACCT CTCCGGCCTC CCTCTCGTTC AAACCCTAGC CGCAATCTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006027	Arabidopsis lyrata	85.51	0.00e+00	1091.00
IUUC-Ath-007054	Arabidopsis thaliana	83.84	0.00e+00	1079.00
IUUC-Bol-015901	Brassica oleracea	96.80	0.00e+00	1177.00
IUUC-Gma-043020	Glycine max	68.70	0.00e+00	836.00
IUUC-Mtr-057764	Medicago truncatula	67.14	0.00e+00	797.00
IUUC-Mac-065609	Musa acuminata	48.27	3.00e-154	538.00
IUUC-Obr-076773	Oryza brachyantha	53.38	3.00e-81	294.00
IUUC-Osa-085662	Oryza sativa	47.97	7.00e-141	493.00
IUUC-Pop-099239	Populus trichocarpa	68.41	0.00e+00	811.00
IUUC-Ppe-101890	Prunus persica	68.36	0.00e+00	776.00
IUUC-Smo-109110	Selaginella moellendorffii	40.66	7.00e-111	394.00
IUUC-Sly-111463	Solanum lycopersicum	65.29	0.00e+00	772.00
IUUC-Stu-111976	Solanum tuberosum	65.02	0.00e+00	772.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence