iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099705

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000347

Gene Name

POPTRDRAFT_728143; POPTR_0011s07030g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0011s07030	POPTR_0011s07030.1	POPTR_0011s07030.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.30e-14	53.6	273	289

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 14   tllvsGsdDgtikvWDl 30
           +l++sG++D+++kvWD 
   Q: 273  KLIISGGNDKSVKVWDC 289
           789*************5 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MTEPRRLRGH KATATCCIAS RDRSGVVATA GEDGCICLFD MRCKDAQHIA EVAQEPISSL 60
SFKPGNEDIM YVSCGNAVKC FDLHNMASPW TPFKSYTYNK EEINQISCNS KATFLASTDD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACAAAAAAGA AAGGAGAAGA GGTAAGAGAG GGAGAGAGAG ATAGAGAGAG AGATTCATGA 60
CAGAGCCAAG GAGATTGAGA GGTCACAAAG CCACTGCCAC GTGCTGCATC GCCTCACGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

pop:POPTR_0011s07030g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000124	Aegilops tauschii	48.66	3.00e-79	288.00
IUUC-Aml-001203	Ailuropoda melanoleuca	24.73	4.00e-26	111.00
IUUC-Atr-002680	Amborella trichopoda	50.00	2.00e-81	295.00
IUUC-Apl-003656	Anas platyrhynchos	25.09	1.00e-20	93.20
IUUC-Aca-004987	Anolis carolinensis	27.12	9.00e-24	103.00
IUUC-Aly-006254	Arabidopsis lyrata	61.60	6.00e-121	426.00
IUUC-Ath-006632	Arabidopsis thaliana	61.26	7.00e-122	429.00
IUUC-Ame-011032	Astyanax mexicanus	26.32	3.00e-26	112.00
IUUC-Bta-012588	Bos taurus	25.95	1.00e-27	116.00
IUUC-Bdi-014532	Brachypodium distachyon	48.40	3.00e-88	318.00
IUUC-Bol-015542	Brassica oleracea	55.28	4.00e-104	371.00
IUUC-Bra-017046	Brassica rapa	59.77	3.00e-113	402.00
IUUC-Cja-019365	Callithrix jacchus	25.75	8.00e-28	117.00
IUUC-Cfa-021090	Canis familiaris	25.27	1.00e-26	113.00
IUUC-Cpo-021517	Cavia porcellus	24.46	1.00e-23	103.00
IUUC-Csa-023041	Chlorocebus sabaeus	25.47	4.00e-28	118.00
IUUC-Cho-024801	Choloepus hoffmanni	25.54	1.00e-27	116.00
IUUC-Dre-028437	Danio rerio	25.27	1.00e-21	96.70
IUUC-Dno-029267	Dasypus novemcinctus	26.30	4.00e-27	114.00
IUUC-Ete-032726	Echinops telfairi	19.84	1.00e-08	53.50
IUUC-Eca-033621	Equus caballus	25.54	4.00e-28	118.00
IUUC-Eeu-034461	Erinaceus europaeus	25.27	1.00e-25	109.00
IUUC-Fca-036410	Felis catus	24.73	4.00e-25	108.00
IUUC-Fal-036676	Ficedula albicollis	24.11	4.00e-24	105.00
IUUC-Gac-041905	Gasterosteus aculeatus	26.88	1.00e-25	109.00
IUUC-Gma-043066	Glycine max	52.77	7.00e-102	363.00
IUUC-Ggo-044881	Gorilla gorilla	24.93	6.00e-27	114.00
IUUC-Hsa-046836	Homo sapiens	25.47	6.00e-28	117.00
IUUC-Hvu-047651	Hordeum vulgare	52.65	6.00e-92	330.00
IUUC-Itr-048206	Ictidomys tridecemlineatus	25.47	2.00e-28	119.00
IUUC-Lch-050406	Latimeria chalumnae	24.27	4.00e-18	85.10
IUUC-Lpe-051023	Leersia perrieri	44.61	2.00e-74	271.00
IUUC-Loc-052878	Lepisosteus oculatus	25.48	4.00e-25	108.00
IUUC-Laf-053547	Loxodonta africana	25.47	6.00e-26	110.00
IUUC-Mcc-054646	Macaca mulatta	25.47	9.00e-28	117.00
IUUC-Meu-056381	Macropus eugenii	23.91	1.00e-23	103.00
IUUC-Mtr-058656	Medicago truncatula	52.38	2.00e-106	378.00
IUUC-Mmr-061601	Microcebus murinus	24.93	2.00e-27	116.00
IUUC-Mdo-062305	Monodelphis domestica	24.18	2.00e-25	108.00
IUUC-Mmu-063213	Mus musculus	25.20	1.00e-27	116.00
IUUC-Mac-064940	Musa acuminata	52.37	5.00e-112	397.00
IUUC-Mpu-066629	Mustela putorius furo	25.61	7.00e-27	114.00
IUUC-Nle-069860	Nomascus leucogenys	25.07	4.00e-27	115.00
IUUC-Opr-071180	Ochotona princeps	25.57	1.00e-14	73.20
IUUC-Ont-071912	Oreochromis niloticus	25.69	1.00e-23	103.00
IUUC-Ocu-074874	Oryctolagus cuniculus	24.93	7.00e-26	110.00
IUUC-Oba-075815	Oryza barthii	47.21	3.00e-72	264.00
IUUC-Obr-076835	Oryza brachyantha	49.24	3.00e-70	258.00
IUUC-Ogu-077977	Oryza glumaepatula	47.21	2.00e-70	259.00
IUUC-Oin-079206	Oryza indica	51.47	2.00e-90	325.00
IUUC-Olo-080621	Oryza longistaminata	45.60	2.00e-71	262.00
IUUC-Ome-081261	Oryza meridionalis	46.40	3.00e-70	258.00
IUUC-Oni-082280	Oryza nivara	47.58	4.00e-26	111.00
IUUC-Opu-083256	Oryza punctata	48.49	3.00e-78	285.00
IUUC-Oru-084531	Oryza rufipogon	42.40	2.00e-59	222.00
IUUC-Osa-085892	Oryza sativa	51.47	2.00e-90	325.00
IUUC-Ola-086701	Oryzias latipes	27.78	3.00e-26	112.00
IUUC-Oga-088152	Otolemur garnettii	27.17	6.00e-28	117.00
IUUC-Oar-089681	Ovis aries	25.27	3.00e-27	115.00
IUUC-Ptr-091142	Pan troglodytes	25.20	3.00e-27	115.00
IUUC-Pan-092435	Papio anubis	25.80	1.00e-25	109.00
IUUC-Psi-093255	Pelodiscus sinensis	24.21	1.00e-23	103.00
IUUC-Ppa-095829	Physcomitrella patens	38.22	5.00e-60	224.00
IUUC-Pfo-097339	Poecilia formosa	27.18	2.00e-26	112.00
IUUC-Pab-098274	Pongo abelii	24.93	4.00e-27	114.00
IUUC-Pca-100451	Procavia capensis	25.20	4.00e-25	108.00
IUUC-Ppe-101220	Prunus persica	63.54	9.00e-132	462.00
IUUC-Pva-102385	Pteropus vampyrus	24.80	7.00e-27	114.00
IUUC-Rno-105765	Rattus norvegicus	25.47	4.00e-27	114.00
IUUC-Sha-106533	Sarcophilus harrisii	24.66	2.00e-24	105.00
IUUC-Smo-109248	Selaginella moellendorffii	35.49	2.00e-59	222.00
IUUC-Sit-110297	Setaria italica	50.17	4.00e-62	230.00
IUUC-Sly-111617	Solanum lycopersicum	54.62	1.00e-114	405.00
IUUC-Stu-112531	Solanum tuberosum	55.67	1.00e-116	412.00
IUUC-Sar-113647	Sorex araneus	25.80	1.00e-25	110.00
IUUC-Sbi-114621	Sorghum bicolor	51.72	4.00e-99	353.00
IUUC-Tgu-116482	Taeniopygia guttata	24.38	5.00e-19	87.80
IUUC-Tru-118622	Takifugu rubripes	24.60	3.00e-21	95.50
IUUC-Tsy-119474	Tarsius syrichta	24.12	2.00e-24	105.00
IUUC-Tni-120250	Tetraodon nigroviridis	22.10	2.00e-14	72.80
IUUC-Tca-121583	Theobroma cacao	62.73	2.00e-134	471.00
IUUC-Tae-123764	Triticum aestivum	52.65	9.00e-92	329.00
IUUC-Tur-126076	Triticum urartu	42.78	3.00e-68	251.00
IUUC-Tbe-127545	Tupaia belangeri	25.96	5.00e-28	117.00
IUUC-Ttr-128497	Tursiops truncatus	24.73	4.00e-26	111.00
IUUC-Vpa-130772	Vicugna pacos	24.18	7.00e-25	107.00
IUUC-Vvi-131632	Vitis vinifera	67.45	3.00e-140	491.00
IUUC-Xma-133432	Xiphophorus maculatus	27.27	6.00e-27	114.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence