iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099366

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KE702974

Gene Name

POPTRDRAFT_568751; POPTR_0267s00200g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0267s00200	POPTR_0267s00200.1	POPTR_0267s00200.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.20e-08	34.7	103	145

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl  +   d ++vlp C+H+fh +C+ +w         + +CP+Cr
   Q: 103  CSICLGTIveGDTVRVLPnCKHTFHVECIDMW------LGSHSTCPICR 145
           ********77444*******************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGGSDDDDHK KRVSQKVMLA MFLCSFGFVL LLVLLHLYSR HRLRSQRRRH AIFFHGLGRQ 60
TTPDIEESIE PPKRGLDPLV ISSLPLFTYK LADQTDHGEP VECSICLGTI VEGDTVRVLP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAGTCAAGA TTCGGGTGCA AAGGTTTCCT ACTCCAGCAA CATCTTCCAA AGCCTCACCC 60
AACATATTCT GTTATTGAAA TTAGCAAAGC TTAAAAATGT GAACAACTTC TTTACACAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0267s00200g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003161	Amborella trichopoda	42.86	8.00e-24	103.00
IUUC-Gma-042858	Glycine max	47.59	2.00e-37	148.00
IUUC-Lpe-051720	Leersia perrieri	48.24	1.00e-19	88.60
IUUC-Mla-058831	Melampsora laricipopulina	27.87	5.00e-08	52.40
IUUC-Obr-076113	Oryza brachyantha	46.15	2.00e-17	82.00
IUUC-Ogu-078013	Oryza glumaepatula	57.14	8.00e-20	89.40
IUUC-Ome-081292	Oryza meridionalis	48.84	7.00e-21	92.80
IUUC-Opu-083516	Oryza punctata	52.78	4.00e-19	88.20
IUUC-Sit-110423	Setaria italica	48.42	8.00e-21	92.40
IUUC-Sbi-114283	Sorghum bicolor	44.55	4.00e-20	90.50
IUUC-Tca-121522	Theobroma cacao	53.78	2.00e-46	177.00
IUUC-Tae-124486	Triticum aestivum	49.43	1.00e-21	96.30
IUUC-Tme-127142	Tuber melanosporum	37.31	9.00e-09	55.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence