iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099091

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

EF145964

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0011s05150	POPTR_0011s05150.1	POPTR_0011s05150.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.00e-05	26.6	27	88
E3 activity/RING/RING	4.50e-07	31.4	30	77

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggk........tcPvtrqplteedlvPn 58
            f C I ++  ++Pvv+ +G+ y   +I kwl  +          +cPv+++ +++++++P 
   Q: 27   CFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSAslasdehpQCPVCKADISHTTMIPL 88
           599*****************************5554455566667***************96 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw...pglknssskefrCPlCr 46
           C iC++   + p+v+ CgH+++  C++kw   +  +  s  + +CP+C+
   Q: 30   CNICFDFAHE-PVVTLCGHLYCWPCIYKWlhvQSASLASDEHPQCPVCK 77
           99****8877.999***************99755566677788*****7 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MEFEKYFTQG WKSVSSAATD SENPSGCFDC NICFDFAHEP VVTLCGHLYC WPCIYKWLHV 60
QSASLASDEH PQCPVCKADI SHTTMIPLYG RGQGSTEAEG KTPYRGMIIP PRPSACGAQG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACCAGTCCC CTTCGCAAAA ATCTCTCTGT CTCTCTGTTA TCTGCAAAAT CTCCATTAAA 60
GCTTCCTCGA ATCCTCTTAT TTTAATCAAG CCAAACAACA CACTGTTATT TTGCCTTTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0472--Membrane
KW-0479--Metal-binding
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-043239	Glycine max	64.02	1.00e-79	288.00
IUUC-Mtr-057847	Medicago truncatula	57.14	1.00e-63	235.00
IUUC-Ppe-101989	Prunus persica	68.70	4.00e-88	317.00
IUUC-Sly-111102	Solanum lycopersicum	51.77	2.00e-58	218.00
IUUC-Stu-112310	Solanum tuberosum	54.42	8.00e-65	239.00
IUUC-Tca-121250	Theobroma cacao	71.97	9.00e-85	305.00
IUUC-Tae-123759	Triticum aestivum	38.36	1.00e-26	112.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence