iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
Protein-protein Interaction
PINA	HINT
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UIM	38.96	7.00e-12	68.20	IUUC-Sce-106192
UBD/Alpha-Helix/UIM	39.80	1.00e-14	77.40	IUUC-Spo-108220

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MLEKIGLPPK PSLRGNSWVV DASHCQGCSS QFTFINRKHH CRRCGGLFCG TCTQQRLSLR 60
GQGDSPVRIC EPCKKIEEAA RFELRHGYKN RAAKGGSSKR TVKNEDDVLS EILGSDVDVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTATTAGTTA AAATTATTTA TTTTATATCT GACAATAGAG GAGGAAAAGT ATTCTTCTTC 60
TTCTTCTTCT TCATCTGCTC GATCTTTTAC ATTTCCGGTA AGATCAAAAT CAAAACCAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat
IPR000306--Znf_FYVE
IPR017455--Znf_FYVE-rel
IPR011011--Znf_FYVE_PHD
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50178--ZF_FYVE

Pfam

PF01363--FYVE

SMART

SM00064--FYVE
SM00028--TPR

Gene Ontology

GO:0009506--C:plasmodesma
GO:0046872--F:metal ion binding

KEGG

ath:AT1G61690

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002790	Amborella trichopoda	44.46	2.00e-119	422.00
IUUC-Aly-006019	Arabidopsis lyrata	92.50	0.00e+00	1936.00
IUUC-Ago-007931	Ashbya gossypii	50.88	2.00e-14	73.90
IUUC-Aor-009903	Aspergillus oryzae	45.95	2.00e-04	40.40
IUUC-Bdi-014708	Brachypodium distachyon	45.72	7.00e-112	398.00
IUUC-Bol-015456	Brassica oleracea	76.01	0.00e+00	1419.00
IUUC-Bra-016882	Brassica rapa	90.00	3.00e-56	208.00
IUUC-Cre-022770	Chlamydomonas reinhardtii	35.94	3.00e-06	46.60
IUUC-Cho-024314	Choloepus hoffmanni	42.19	3.00e-13	69.30
IUUC-Hvu-047628	Hordeum vulgare	48.79	1.00e-116	413.00
IUUC-Kpa-049327	Komagataella pastoris	50.88	5.00e-14	72.40
IUUC-Lch-049451	Latimeria chalumnae	39.66	9.00e-10	59.30
IUUC-Lpe-051694	Leersia perrieri	49.43	6.00e-131	461.00
IUUC-Meu-056668	Macropus eugenii	34.48	3.00e-09	57.40
IUUC-Mor-056945	Magnaporthe oryzae	42.55	7.00e-09	55.50
IUUC-Mpo-057355	Magnaporthe poae	37.50	2.00e-08	53.50
IUUC-Mtr-057931	Medicago truncatula	45.48	0.00e+00	748.00
IUUC-Mla-058849	Melampsora laricipopulina	45.00	2.00e-12	67.40
IUUC-Mac-064661	Musa acuminata	49.17	2.00e-128	452.00
IUUC-Mlu-067420	Myotis lucifugus	41.79	9.00e-15	74.70
IUUC-Opr-070833	Ochotona princeps	45.90	1.00e-13	71.20
IUUC-Oan-073295	Ornithorhynchus anatinus	40.30	7.00e-14	72.00
IUUC-Oba-075700	Oryza barthii	49.50	1.00e-122	434.00
IUUC-Olo-080646	Oryza longistaminata	49.36	1.00e-122	433.00
IUUC-Psi-093910	Pelodiscus sinensis	41.79	3.00e-15	76.30
IUUC-Pma-094728	Petromyzon marinus	43.10	2.00e-12	68.20
IUUC-Ppa-095539	Physcomitrella patens	37.78	2.00e-50	194.00
IUUC-Pop-099314	Populus trichocarpa	46.06	0.00e+00	780.00
IUUC-Ppe-101948	Prunus persica	51.92	2.00e-149	523.00
IUUC-Pgr-103609	Puccinia graminis	44.64	5.00e-12	65.50
IUUC-Ptt-103865	Puccinia triticina	40.58	2.00e-11	63.90
IUUC-Sce-106192	Saccharomyces cerevisiae	38.96	7.00e-13	68.20
IUUC-Sja-107931	Schizosaccharomyces japonicus	46.55	3.00e-13	69.70
IUUC-Spo-108220	Schizosaccharomyces pombe	39.80	1.00e-15	77.40
IUUC-Smo-109055	Selaginella moellendorffii	48.03	4.00e-63	236.00
IUUC-Stu-112464	Solanum tuberosum	48.52	3.00e-142	499.00
IUUC-Tca-121043	Theobroma cacao	48.95	0.00e+00	863.00
IUUC-Tbe-127863	Tupaia belangeri	40.30	2.00e-13	70.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence