iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099343

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000342

Gene Name

POPTRDRAFT_560165; POPTR_0006s01370g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s01370	POPTR_0006s01370.1	POPTR_0006s01370.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	44.03	6.00e-77	285.00	IUUC-Ath-007525

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSRIPHEVIH DILLQLPVKS LIRFRSLSKP ICSLIDGPNF INLHLNHSIT TKSNHSIILK 60
EWDLFAVDFD ALSDAVEVKH HPLYSGGGTE VIGSVNGLVF LRRSETNIAV YNLSTRECKK 120

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Nucleotide Sequence
(Fasta)

AACTAACCAA CCTAACCTCT TCATTAAAAA ATGTCGAGAA TCCCACACGA GGTCATTCAC 60
GACATTTTGC TTCAACTTCC GGTGAAATCC CTCATCCGTT TCCGATCTCT ATCAAAACCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR017451--F-box-assoc_interact_dom
IPR001810--F-box_dom
IPR015915--Kelch-typ_b-propeller

PROSITE

PS50181--FBOX

Pfam

PF00646--F-box

SMART

SM00256--FBOX

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0031146--P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0006s01370g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006102	Arabidopsis lyrata	42.31	1.00e-72	266.00
IUUC-Ath-007525	Arabidopsis thaliana	42.89	1.00e-78	286.00
IUUC-Ang-009855	Aspergillus niger	37.74	1.70e-01	30.00
IUUC-Ate-010552	Aspergillus terreus	39.39	3.40e-01	30.00
IUUC-Bol-016596	Brassica oleracea	42.79	2.00e-85	308.00
IUUC-Bra-016667	Brassica rapa	43.07	2.00e-85	308.00
IUUC-Eeu-034753	Erinaceus europaeus	21.67	4.10e-01	28.50
IUUC-Gma-043754	Glycine max	34.22	7.00e-57	214.00
IUUC-Mtr-057739	Medicago truncatula	33.25	1.00e-53	203.00
IUUC-Ppe-102037	Prunus persica	39.76	6.00e-73	267.00
IUUC-Pyt-104664	Pyrenophora triticirepentis	26.67	1.50e-01	30.00
IUUC-Sly-111548	Solanum lycopersicum	35.63	2.00e-45	175.00
IUUC-Stu-112748	Solanum tuberosum	34.56	5.00e-53	201.00
IUUC-Tca-121319	Theobroma cacao	51.09	4.00e-103	367.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence