iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006558

UUCD1 version

UUC-ArL-01061

Ensembl Protein ID

Al_scaffold_0008_2062

UniProt Accession

D7ML88; D7ML88_ARALL

Genbank Protein ID

EFH40699.1

Protein Name

Predicted protein

Genbank Nucleotide ID

GL348720

Gene Name

ARALYDRAFT_685242

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Al_scaffold_0008_2062	Al_scaffold_0008_2062	Al_scaffold_0008_2062

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.00e-06	27.7	318	350

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH d  ++ a+ ++  ++++G+ D+t+++WD+r
   Q: 318  GHLDYSFASAWhPNgVTFATGNQDKTCRIWDTR 350
           799999999***777999*************87 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSDYNGDDLE DEYMADEYDM DDLEDDMNAE FDGRDIDASS DSEVEDFDQL NKAADTSAAQ 60
ARNGKDIQGI PWDRLNTTRK EYRKTRLEQY KNYENIPNSG EESAKKCMNT EKGSSFYEFR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTGATT ACAATGGTGA TGATCTTGAA GATGAATATA TGGCTGATGA GTATGACATG 60
GATGATCTCG AGGATGATAT GAATGCTGAG TTTGATGGAA GAGATATCGA TGCTTCTTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

aly:ARALYDRAFT_685242

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001117	Aegilops tauschii	71.22	0.00e+00	638.00
IUUC-Atr-003022	Amborella trichopoda	71.21	0.00e+00	651.00
IUUC-Ath-006618	Arabidopsis thaliana	96.65	0.00e+00	804.00
IUUC-Bdi-014834	Brachypodium distachyon	71.22	0.00e+00	643.00
IUUC-Bol-016279	Brassica oleracea	87.22	0.00e+00	807.00
IUUC-Bra-016810	Brassica rapa	92.40	0.00e+00	821.00
IUUC-Dse-031456	Dothistroma septosporum	30.99	1.00e-40	160.00
IUUC-Gma-043054	Glycine max	70.00	0.00e+00	667.00
IUUC-Hvu-047631	Hordeum vulgare	60.45	7.00e-162	562.00
IUUC-Lpe-050907	Leersia perrieri	66.99	2.00e-168	584.00
IUUC-Mtr-058694	Medicago truncatula	69.33	0.00e+00	654.00
IUUC-Mac-065126	Musa acuminata	71.22	0.00e+00	640.00
IUUC-Oba-075716	Oryza barthii	70.42	0.00e+00	634.00
IUUC-Obr-076195	Oryza brachyantha	62.26	2.00e-165	574.00
IUUC-Ogl-077272	Oryza glaberrima	69.73	0.00e+00	628.00
IUUC-Ogu-078041	Oryza glumaepatula	70.17	0.00e+00	631.00
IUUC-Oin-079991	Oryza indica	61.23	3.00e-165	573.00
IUUC-Olo-080659	Oryza longistaminata	57.36	2.00e-139	488.00
IUUC-Ome-081872	Oryza meridionalis	59.95	7.00e-156	542.00
IUUC-Oni-082371	Oryza nivara	70.17	0.00e+00	631.00
IUUC-Opu-083680	Oryza punctata	62.26	7.00e-167	579.00
IUUC-Oru-085156	Oryza rufipogon	70.17	0.00e+00	632.00
IUUC-Osa-086197	Oryza sativa	70.17	0.00e+00	632.00
IUUC-Pop-099666	Populus trichocarpa	68.81	0.00e+00	657.00
IUUC-Pte-104305	Pyrenophora teres	29.64	5.00e-47	181.00
IUUC-Pyt-104723	Pyrenophora triticirepentis	30.05	2.00e-47	183.00
IUUC-Sja-107761	Schizosaccharomyces japonicus	35.64	6.00e-50	190.00
IUUC-Sit-110589	Setaria italica	65.95	2.00e-172	597.00
IUUC-Sly-111343	Solanum lycopersicum	71.27	0.00e+00	674.00
IUUC-Stu-112207	Solanum tuberosum	70.76	0.00e+00	665.00
IUUC-Sbi-113791	Sorghum bicolor	71.22	0.00e+00	640.00
IUUC-Tca-121187	Theobroma cacao	75.89	0.00e+00	689.00
IUUC-Tae-122709	Triticum aestivum	67.66	5.00e-170	589.00
IUUC-Tur-126622	Triticum urartu	64.40	3.00e-178	617.00
IUUC-Vvi-131183	Vitis vinifera	71.71	0.00e+00	685.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence